RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 VN1R4Q7Z5H5 301 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 ASPGQ86U10 573 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 BPIFCQ8NFQ6 507 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 BBS10Q8TAM1 723 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 SMIM4Q8WVI0 70 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 HCAR1Q9BXC0 346 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 SLC22A11Q9NSA0 550 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 EMC3Q9P0I2 261 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 PCOLCE2Q9UKZ9 415 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 ASPMQ8IZT6 3477 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 J3QLW9 94 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 PRAF2O60831 178 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 IGF2P01344 180 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 ACAA1P09110 424 aaPredicted RBP14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 ZNF19P17023 458 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 ANXA7P20073 488 aaKnown RBP14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 MST1P26927 711 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 SLC16A1P53985 500 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 SEC61A1P61619 476 aaKnown RBP14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 NFATC4Q14934 902 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 FAAP20Q6NZ36 180 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 GSG1LQ6UXU4 331 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 OR2T33Q8NG76 320 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 SFT2D1Q8WV19 159 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 LCORQ96JN0 433 aaPredicted RBP14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 WDR92Q96MX6 357 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 JAM3Q9BX67 310 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 FBRSQ9HAH7 460 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 TMEM74BQ9NUR3 256 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 WNT16Q9UBV4 365 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 SIT1Q9Y3P8 196 aa14.64□□□□□ -0.07
MAP1LC3B-201ENST00000268607 A0A1B0GUH1 482 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 ZNF860A6NHJ4 632 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 GPR31O00270 319 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 PLPP2O43688 288 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 HYAL3O43820 417 aaPredicted RBP14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 GIPP09681 153 aaPredicted RBP14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 ZNF888P0CJ79 500 aaPredicted RBP14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 GCGRP47871 477 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 STARD6P59095 220 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 OC90Q02509 493 aaPredicted RBP14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 PRRT3Q5FWE3 981 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 ZNF660Q6AZW8 331 aaPredicted RBP14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 MRM1Q6IN84 353 aaKnown RBP14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 ZNF613Q6PF04 617 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 ZNF620Q6ZNG0 422 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 PXKQ7Z7A4 578 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 VRK2Q86Y07 508 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 CBLN2Q8IUK8 224 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 ZFP82Q8N141 532 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 C4orf36Q96KX1 117 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 TAS2R3Q9NYW6 316 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 A0A0G2JPF8 293 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 HNRNPCL3B7ZW38 293 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 CDC42EP2O14613 210 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 ECDO95905 644 aaPredicted RBP14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 HNRNPCL4P0DMR1 293 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 AKT2P31751 481 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 TNFRSF17Q02223 184 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 ID2Q02363 134 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 KIAA0895LQ68EN5 471 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 ZNF425Q6IV72 752 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 APOOLQ6UXV4 268 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 GLDNQ6ZMI3 551 aaPredicted RBP14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 BOLLQ8N9W6 283 aaKnown RBP14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 FAM98AQ8NCA5 519 aaKnown RBP14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 FAM71CQ8NEG0 241 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 DIO2Q92813 273 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 HSPA12BQ96MM6 686 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 IFT27Q9BW83 186 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 NOX3Q9HBY0 568 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 MED17Q9NVC6 651 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 ZMIZ1Q9ULJ6 1067 aa14.63□□□□□ -0.07
MAP1LC3B-201ENST00000268607 OR2W5A6NFC9 320 aa14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 GSTZ1O43708 216 aaPredicted RBP14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 MT-ND5P03915 603 aa14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 ZNF806P0C7X5 589 aa14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 SPP1P10451 314 aa14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 EPXP11678 715 aa14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 PVRP15151 417 aa14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 PPP3CBP16298 524 aa14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 FPR3P25089 353 aa14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 STAT5AP42229 794 aa14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 FNTBP49356 437 aa14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 TRA2BP62995 288 aaKnown RBP14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 ST3GAL3Q11203 375 aa14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 DEFB134Q4QY38 66 aa14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 ZNF311Q5JNZ3 666 aa14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 FAM74A1Q5RGS3 127 aa14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 ELP2Q6IA86 826 aa14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 HAGHLQ6PII5 290 aaPredicted RBP14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 SPICQ8N5J4 248 aa14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 OR1M1Q8NGA1 313 aa14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 TMEM255BQ8WV15 326 aa14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 NDC1Q9BTX1 674 aa14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 ADAT1Q9BUB4 502 aaKnown RBP14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 TTTY10Q9BZA0 68 aa14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 NANSQ9NR45 359 aa14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 CES1P1Q9UKY3 287 aa14.62□□□□□ -0.07
MAP1LC3B-201ENST00000268607 NPFFR2Q9Y5X5 522 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms