RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 CLUP10909 449 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 CD36P16671 472 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 FKBP2P26885 142 aaKnown RBP14.76□□□□□ -0.05
TPM1-201ENST00000267996 CYB561P49447 251 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 ZP4Q12836 540 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 ARMCX4Q5H9R4 360 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 SLC6A19Q695T7 634 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 C19orf48Q6RUI8 117 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 SHFQ7M4L6 423 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 P2RY8Q86VZ1 359 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 GTPBP8Q8N3Z3 284 aaPredicted RBP14.76□□□□□ -0.05
TPM1-201ENST00000267996 SCAIQ8N9R8 606 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 ZNF485Q8NCK3 441 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 PSD4Q8NDX1 1056 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 RASD2Q96D21 266 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 NMNAT3Q96T66 252 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 TSC22D3Q99576 134 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 ASPNQ9BXN1 380 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 OR51V1Q9H2C8 321 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 STMN3Q9NZ72 180 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 TNFRSF10DQ9UBN6 386 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 TEKT2Q9UIF3 430 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 OR6C68A6NDL8 312 aa14.75□□□□□ -0.05
TPM1-201ENST00000267996 IGHMP01871 453 aa14.75□□□□□ -0.05
TPM1-201ENST00000267996 P04436 131 aa14.75□□□□□ -0.05
TPM1-201ENST00000267996 LIPCP11150 499 aa14.75□□□□□ -0.05
TPM1-201ENST00000267996 IMPDH2P12268 514 aa14.75□□□□□ -0.05
TPM1-201ENST00000267996 CDKN2AP42771 156 aaKnown RBP14.75□□□□□ -0.05
TPM1-201ENST00000267996 CLK1P49759 484 aaKnown RBP14.75□□□□□ -0.05
TPM1-201ENST00000267996 SLC25A1P53007 311 aa14.75□□□□□ -0.05
TPM1-201ENST00000267996 DSCR4P56555 118 aaPredicted RBP14.75□□□□□ -0.05
TPM1-201ENST00000267996 FOXK1P85037 733 aa14.75□□□□□ -0.05
TPM1-201ENST00000267996 MED22Q15528 200 aa14.75□□□□□ -0.05
TPM1-201ENST00000267996 KLHL12Q53G59 568 aa14.75□□□□□ -0.05
TPM1-201ENST00000267996 C3orf33Q6P1S2 294 aa14.75□□□□□ -0.05
TPM1-201ENST00000267996 EXD3Q8N9H8 876 aa14.75□□□□□ -0.05
TPM1-201ENST00000267996 LSM14AQ8ND56 463 aaKnown RBP14.75□□□□□ -0.05
TPM1-201ENST00000267996 OR1J4Q8NGS1 313 aa14.75□□□□□ -0.05
TPM1-201ENST00000267996 ZNF417Q8TAU3 575 aa14.75□□□□□ -0.05
TPM1-201ENST00000267996 OPALINQ96PE5 141 aa14.75□□□□□ -0.05
TPM1-201ENST00000267996 TSPAN32Q96QS1 320 aa14.75□□□□□ -0.05
TPM1-201ENST00000267996 ZNF587Q96SQ5 575 aaPredicted RBP14.75□□□□□ -0.05
TPM1-201ENST00000267996 SACM1LQ9NTJ5 587 aa14.75□□□□□ -0.05
TPM1-201ENST00000267996 CHCHD3Q9NX63 227 aaKnown RBP14.75□□□□□ -0.05
TPM1-201ENST00000267996 SPIN1Q9Y657 262 aaPredicted RBP14.75□□□□□ -0.05
TPM1-201ENST00000267996 LIPT2A6NK58 231 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 MYL12BO14950 172 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 ZIC3O60481 467 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 CBR3O75828 277 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 SCG5P05408 212 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 DPP4P27487 766 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 IDUAP35475 653 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 RGS6P49758 472 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 SELENBP1Q13228 472 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 GGTLC2Q14390 218 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.74□□□□□ -0.059e-6■■■■□ 24.9
TPM1-201ENST00000267996 SLC35D3Q5M8T2 416 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 B3GLCTQ6Y288 498 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 OR51G2Q8NGK0 314 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 SLC25A43Q8WUT9 341 aaPredicted RBP14.74□□□□□ -0.05
TPM1-201ENST00000267996 DNAJA3Q96EY1 480 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 GNRHR2Q96P88 292 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 ADGRL4Q9HBW9 690 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 INIPQ9NRY2 104 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 ANKRD10Q9NXR5 420 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 MED13Q9UHV7 2174 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 G3V3Y1 287 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 CDK2AP1O14519 115 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 SBK2P0C263 348 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 DIO1P49895 249 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 WNT4P56705 351 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 LGALS3BPQ08380 585 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 DBPQ10586 325 aaPredicted RBP14.74□□□□□ -0.05
TPM1-201ENST00000267996 MLLT11Q13015 90 aaPredicted RBP14.74□□□□□ -0.05
TPM1-201ENST00000267996 LSAMPQ13449 338 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 AQP6Q13520 282 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 CAMK2BQ13554 666 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 KRR1Q13601 381 aaKnown RBP14.74□□□□□ -0.05
TPM1-201ENST00000267996 C1DQ13901 141 aaKnown RBP14.74□□□□□ -0.05
TPM1-201ENST00000267996 RTP5Q14D33 572 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 MESTQ5EB52 335 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 ABHD17BQ5VST6 288 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 ACBD7Q8N6N7 88 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 OR9Q1Q8NGQ5 310 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 ZPLD1Q8TCW7 415 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 ISYNA1Q9NPH2 558 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 FANCFQ9NPI8 374 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 INPP5EQ9NRR6 644 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 ERVK13-1Q9NX77 482 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 ALKBH4Q9NXW9 302 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 GRHPRQ9UBQ7 328 aa14.74□□□□□ -0.05
TPM1-201ENST00000267996 ZNF346Q9UL40 294 aaKnown RBP14.74□□□□□ -0.05
TPM1-201ENST00000267996 A0A0G2JMM0 328 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 A0A1W2PPB8 328 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 A0A1W2PPW3 197 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 A0A1W2PRS3 328 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 KIR3DP1A8MWS1 328 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 MS4A18H0YCH9 400 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 GYPBP06028 91 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 HSMCR30P0CW71 290 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms