RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 OR4M1Q8NGD0 313 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 CNOT2Q9NZN8 540 aaKnown RBP17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 PRRT4C9JH25 899 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 EFSO43281 561 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 PRAMEF4O60810 478 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 PCBD1P61457 104 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 GDF7Q7Z4P5 450 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 LGALS14Q8TCE9 139 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 OR5M11Q96RB7 305 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 ZNF355PQ9NSJ1 428 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 RABL2AQ9UBK7 228 aaPredicted RBP17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 RABL2BQ9UNT1 228 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 NTNG1Q9Y2I2 539 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 SNAPC5O75971 98 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 TAS2R31P59538 309 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 DCAF7P61962 342 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 TRMT12Q53H54 448 aaKnown RBP17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 ZNF684Q5T5D7 378 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 AADACL3Q5VUY0 350 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 ZNF836Q6ZNA1 936 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 OR14A2Q96R54 314 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 EMC6Q9BV81 110 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 AMBRA1Q9C0C7 1298 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 HSFX1Q9UBD0 423 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 SLC23A2Q9UGH3 650 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 ABLIM3O94929 683 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 MYF5P13349 255 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 MBOAT2Q6ZWT7 520 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 C12orf45Q8N5I9 185 aaPredicted RBP17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 TMEM106AQ96A25 262 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 METTL9Q9H1A3 318 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 SF3B4Q15427 424 aaKnown RBP eCLIP17.29■□□□□ 0.361e-6■■■□□ 19.2
SMARCC1-201ENST00000254480 GLYR1Q49A26 553 aaPredicted RBP17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 OTPQ5XKR4 325 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 DNAJC22Q8N4W6 341 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 CCL4L1Q8NHW4 92 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 H1FXQ92522 213 aaKnown RBP17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 ARL11Q969Q4 196 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 GPATCH2Q9NW75 528 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 MDFIC2A0A1B0GVS7 189 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 PTGER4P35408 488 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 FAM26DQ5JW98 314 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 NPSR1Q6W5P4 371 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 TMEM45AQ9NWC5 275 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 WIF1Q9Y5W5 379 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 GAPDHSO14556 408 aaPredicted RBP17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 HMGA1P17096 107 aaKnown RBP17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 ELAVL4P26378 380 aaKnown RBP17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 PRKAR1BP31321 381 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 SLC1A3P43003 542 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 GGTA1PQ4G0N0 100 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 DCLRE1CQ96SD1 692 aaKnown RBP17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 SEC14L2O76054 403 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 AKR7A3O95154 331 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 ABHD16AO95870 558 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 RPL23AP62750 156 aaKnown RBP17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 BATFQ16520 125 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 OR7G2Q8NG99 324 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 SAT2Q96F10 170 aaPredicted RBP17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 TINAGL1Q9GZM7 467 aaPredicted RBP17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 HIF1ANQ9NWT6 349 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 PLPP1O14494 284 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 HCCSP53701 268 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 FOXK2Q01167 660 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 TATDN3Q17R31 274 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 UBE2NLQ5JXB2 153 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 HBMQ6B0K9 141 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 KIAA0907Q7Z7F0 614 aaPredicted RBP17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 SIDT1Q9NXL6 827 aaKnown RBP17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 RFPL3O75679 317 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 IFNA10P01566 189 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 ADPRHP54922 357 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 LIM2P55344 173 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 PLPP7Q8NBV4 271 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 CPNE5Q9HCH3 593 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 ATP13A2Q9NQ11 1180 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 ADAM29Q9UKF5 820 aa17.28■□□□□ 0.36
SMARCC1-201ENST00000254480 A0A087WUU8 490 aa17.27■□□□□ 0.36
SMARCC1-201ENST00000254480 NENFQ9UMX5 172 aa17.27■□□□□ 0.36
SMARCC1-201ENST00000254480 TNFRSF10AO00220 468 aa17.27■□□□□ 0.36
SMARCC1-201ENST00000254480 DPM1O60762 260 aa17.27■□□□□ 0.36
SMARCC1-201ENST00000254480 TPOP07202 933 aa17.27■□□□□ 0.36
SMARCC1-201ENST00000254480 TAAR8Q969N4 342 aa17.27■□□□□ 0.36
SMARCC1-201ENST00000254480 FGGYQ96C11 551 aa17.27■□□□□ 0.36
SMARCC1-201ENST00000254480 C8orf44Q96CB5 159 aa17.27■□□□□ 0.36
SMARCC1-201ENST00000254480 ZNF578Q96N58 590 aaPredicted RBP17.27■□□□□ 0.36
SMARCC1-201ENST00000254480 CLEC2DQ9UHP7 191 aa17.27■□□□□ 0.36
SMARCC1-201ENST00000254480 FBXL2Q9UKC9 423 aa17.27■□□□□ 0.36
SMARCC1-201ENST00000254480 BLVRBP30043 206 aaPredicted RBP17.27■□□□□ 0.36
SMARCC1-201ENST00000254480 FAM69AQ5T7M9 428 aa17.27■□□□□ 0.36
SMARCC1-201ENST00000254480 RPL22L1Q6P5R6 122 aaKnown RBP17.27■□□□□ 0.36
SMARCC1-201ENST00000254480 ABHD17CQ6PCB6 329 aa17.27■□□□□ 0.36
SMARCC1-201ENST00000254480 LRRC28Q86X40 367 aaPredicted RBP17.27■□□□□ 0.36
SMARCC1-201ENST00000254480 ZNF486Q96H40 463 aaPredicted RBP17.27■□□□□ 0.36
SMARCC1-201ENST00000254480 C1GALT1Q9NS00 363 aa17.27■□□□□ 0.36
SMARCC1-201ENST00000254480 GFOD1Q9NXC2 390 aa17.27■□□□□ 0.36
SMARCC1-201ENST00000254480 MT-CO2P00403 227 aa17.27■□□□□ 0.35
SMARCC1-201ENST00000254480 GRPP07492 148 aa17.27■□□□□ 0.35
SMARCC1-201ENST00000254480 ENPP1P22413 925 aa17.27■□□□□ 0.35
SMARCC1-201ENST00000254480 RBPJQ06330 500 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms