RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 C3orf49Q96BT1 292 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 MAELQ96JY0 434 aaKnown RBP8.97□□□□□ -0.97
VPS50-201ENST00000251739 ZNF317Q96PQ6 595 aaPredicted RBP8.97□□□□□ -0.97
VPS50-201ENST00000251739 ALKBH3Q96Q83 286 aaPredicted RBP8.97□□□□□ -0.97
VPS50-201ENST00000251739 SLC38A2Q96QD8 506 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 KATNB1Q9BVA0 655 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 PTDSS2Q9BVG9 487 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 RSPO3Q9BXY4 272 aaPredicted RBP8.97□□□□□ -0.97
VPS50-201ENST00000251739 P2RX2Q9UBL9 471 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 LPAR3Q9UBY5 353 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 ZNF443Q9Y2A4 671 aaPredicted RBP8.97□□□□□ -0.97
VPS50-201ENST00000251739 PMF1-BGLAPU3KQ54 211 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 OR6C65A6NJZ3 312 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 ZNF587BE7ETH6 402 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 RPL36A-HNRNPH2H7BZ11 118 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 RFXANKO14593 260 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 KLF11O14901 512 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 RGS9O75916 674 aaPredicted RBP8.96□□□□□ -0.98
VPS50-201ENST00000251739 LGI1O95970 557 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 GHRHP01286 108 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 IGKV3-15P01624 115 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 ETFAP13804 333 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 PAX7P23759 505 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 CXCR1P25024 350 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 NR4A2P43354 598 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 GZMKP49863 264 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 CRISP3P54108 245 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 NAAAQ02083 359 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 EGR4Q05215 589 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 EFNB3Q15768 340 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 ADIPOQQ15848 244 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 ZSWIM7Q19AV6 140 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 GTDC1Q4AE62 458 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 PDCD4Q53EL6 469 aaKnown RBP8.96□□□□□ -0.98
VPS50-201ENST00000251739 KLHL24Q6TFL4 600 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 C6orf89Q6UWU4 347 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 MSANTD1Q6ZTZ1 278 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 ABHD12BQ7Z5M8 362 aaPredicted RBP8.96□□□□□ -0.98
VPS50-201ENST00000251739 MYPOPQ86VE0 399 aaPredicted RBP8.96□□□□□ -0.98
VPS50-201ENST00000251739 ARIH2OSQ8N7S6 290 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 OR52P1PQ8NH57 321 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 STK35Q8TDR2 534 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 SLC35B4Q969S0 331 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 VPS33AQ96AX1 596 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 TRIM44Q96DX7 344 aaPredicted RBP8.96□□□□□ -0.98
VPS50-201ENST00000251739 FBXO17Q96EF6 278 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 AURKBQ96GD4 344 aaPredicted RBP8.96□□□□□ -0.98
VPS50-201ENST00000251739 TMEM19Q96HH6 336 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 DMRTB1Q96MA1 342 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 SPATA9Q9BWV2 254 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 BEX2Q9BXY8 128 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 LINC00470Q9BZP3 86 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 PLK3Q9H4B4 646 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 WDR55Q9H6Y2 383 aaPredicted RBP8.96□□□□□ -0.98
VPS50-201ENST00000251739 SEC61A2Q9H9S3 476 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 TPT1P8Q9HAU6 139 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 SDR39U1Q9NRG7 319 aaPredicted RBP8.96□□□□□ -0.98
VPS50-201ENST00000251739 CA10Q9NS85 328 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 CALML5Q9NZT1 146 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 B3GAT1Q9P2W7 334 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 RCE1Q9Y256 329 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 FKBP7Q9Y680 259 aa8.96□□□□□ -0.98
VPS50-201ENST00000251739 IGHV4-61A0A0C4DH41 118 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 B9A039 149 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 LMX1BO60663 402 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 UPK3AO75631 287 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 IL6P05231 212 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 BCHEP06276 602 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 CECR9P0C854 216 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 PNMTP11086 282 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 IDO1P14902 403 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 CDH2P19022 906 aaPredicted RBP8.95□□□□□ -0.98
VPS50-201ENST00000251739 CALCRP30988 508 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 SERPINF1P36955 418 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 PPOXP50336 477 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 PDLIM4P50479 330 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 SH3BGRP55822 239 aaPredicted RBP8.95□□□□□ -0.98
VPS50-201ENST00000251739 DSTNP60981 165 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 SNRPD2P62316 118 aaKnown RBP8.95□□□□□ -0.98
VPS50-201ENST00000251739 RPS26P11Q5JNZ5 115 aaPredicted RBP8.95□□□□□ -0.98
VPS50-201ENST00000251739 PRAMEF8Q5VWM4 474 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 PRAMEF7Q5VXH5 474 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 ANKRD16Q6P6B7 361 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 MAVSQ7Z434 540 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 SERPINA11Q86U17 422 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 GPAT4Q86UL3 456 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 CADM2Q8N3J6 435 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 ANKS4BQ8N8V4 417 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 MFSD8Q8NHS3 518 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 MSI2Q96DH6 328 aaKnown RBP8.95□□□□□ -0.98
VPS50-201ENST00000251739 ZBTB18Q99592 522 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 PIMREGQ9BSJ6 248 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 SHARPINQ9H0F6 387 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 MOV10Q9HCE1 1003 aaKnown RBP8.95□□□□□ -0.98
VPS50-201ENST00000251739 BCL2L10Q9HD36 194 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 MYOZ1Q9NP98 299 aaPredicted RBP8.95□□□□□ -0.98
VPS50-201ENST00000251739 TMEM45AQ9NWC5 275 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 ADPRHL2Q9NX46 363 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 ZIM2Q9NZV7 527 aa8.95□□□□□ -0.98
VPS50-201ENST00000251739 RASD1Q9Y272 281 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms