RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 MTSS1LQ765P7 747 aa12.82□□□□□ -0.36
SCNN1A-201ENST00000228916 KCT2Q8NC54 265 aa12.82□□□□□ -0.36
SCNN1A-201ENST00000228916 OR4K14Q8NGD5 310 aa12.82□□□□□ -0.36
SCNN1A-201ENST00000228916 OR52E1Q8NGJ3 308 aa12.82□□□□□ -0.36
SCNN1A-201ENST00000228916 OR6N1Q8NGY5 312 aa12.82□□□□□ -0.36
SCNN1A-201ENST00000228916 LRRC46Q96FV0 321 aa12.82□□□□□ -0.36
SCNN1A-201ENST00000228916 PAWRQ96IZ0 340 aaKnown RBP12.82□□□□□ -0.36
SCNN1A-201ENST00000228916 SEMA4CQ9C0C4 833 aa12.82□□□□□ -0.36
SCNN1A-201ENST00000228916 FLRT3Q9NZU0 649 aa12.82□□□□□ -0.36
SCNN1A-201ENST00000228916 C19orf53Q9UNZ5 99 aaPredicted RBP12.82□□□□□ -0.36
SCNN1A-201ENST00000228916 OTOL1A6NHN0 477 aaPredicted RBP12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 CBX7O95931 251 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 TMIGD3P0DMS9 266 aaPredicted RBP12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 CD96P40200 585 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 P2RY2P41231 377 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 TRMT12Q53H54 448 aaKnown RBP12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 SLC35F3Q8IY50 421 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 GAL3ST3Q96A11 431 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 IL21RQ9HBE5 538 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 BARX1Q9HBU1 254 aaPredicted RBP12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 FBXL21Q9UKT6 434 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 SLC27A6Q9Y2P4 619 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 TRPM6Q9BX84 2022 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 ABHD14A-ACY1A0A1B0GW23 586 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 A0A1B0GW55 424 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 RBBP9O75884 186 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 EGFP01133 1207 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 DUX4L2P0CJ85 424 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 DUX4L3P0CJ86 424 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 DUX4L4P0CJ87 422 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 DUX4L5P0CJ88 424 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 DUX4L6P0CJ89 424 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 DUX4L7P0CJ90 424 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 ADRA2CP18825 462 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 RBM34P42696 430 aaKnown RBP12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 UBE2MP61081 183 aaKnown RBP12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 B2MP61769 119 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 SNRPNP63162 240 aaKnown RBP12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 LGALS3BPQ08380 585 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 GRM7Q14831 915 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 NDUFAF6Q330K2 333 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 PCGF3Q3KNV8 242 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 PDSS1Q5T2R2 415 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 DUSP22Q9NRW4 184 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 HPF1Q9NWY4 346 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 SPHK1Q9NYA1 384 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 RASL12Q9NYN1 266 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 DUX4Q9UBX2 424 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 OR1A2Q9Y585 309 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 REV3LO60673 3130 aa12.81□□□□□ -0.36
SCNN1A-201ENST00000228916 A0A1B0GWA3 101 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 EIF4E2O60573 245 aaKnown RBP12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 ADH7P40394 386 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 ZNF684Q5T5D7 378 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 PAQR7Q86WK9 346 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 CACUL1Q86Y37 369 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 OR4N5Q8IXE1 308 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 RELL2Q8NC24 303 aaPredicted RBP12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 RSPH9Q9H1X1 276 aaPredicted RBP12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 TSPAN10Q9H1Z9 355 aaPredicted RBP12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 FKRPQ9H9S5 495 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 IER3IP1Q9Y5U9 82 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 RFPL4AA6NLU0 287 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 RFPL4AL1F8VTS6 287 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 XRCC3O43542 346 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 NDUFB2O95178 105 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 RLN1P04808 185 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 ITGB8P26012 769 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 ITPKBP27987 946 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 CLVS2Q5SYC1 327 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 VN1R4Q7Z5H5 301 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 GRASPQ7Z6J2 395 aaPredicted RBP12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 COX18Q8N8Q8 333 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 RSPRY1Q96DX4 576 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 HSPA12BQ96MM6 686 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 PBX4Q9BYU1 374 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 ADAP2Q9NPF8 381 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 TAS2R8Q9NYW2 309 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 PURGQ9UJV8 347 aaKnown RBP12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 TBX21Q9UL17 535 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 SLC6A5Q9Y345 797 aa12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 MUC22E2RYF6 1773 aaPredicted RBP12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 TP53BP1Q12888 1972 aaPredicted RBP12.8□□□□□ -0.36
SCNN1A-201ENST00000228916 IGLON5A6NGN9 336 aa12.79□□□□□ -0.36
SCNN1A-201ENST00000228916 PRR32B1ATL7 298 aa12.79□□□□□ -0.36
SCNN1A-201ENST00000228916 H2AFB1P0C5Y9 115 aa12.79□□□□□ -0.36
SCNN1A-201ENST00000228916 UBBP0CG47 229 aa12.79□□□□□ -0.36
SCNN1A-201ENST00000228916 UBCP0CG48 685 aaKnown RBP12.79□□□□□ -0.36
SCNN1A-201ENST00000228916 ZNF888P0CJ79 500 aaPredicted RBP12.79□□□□□ -0.36
SCNN1A-201ENST00000228916 MGMTP16455 207 aa12.79□□□□□ -0.36
SCNN1A-201ENST00000228916 CEBPBP17676 345 aa12.79□□□□□ -0.36
SCNN1A-201ENST00000228916 CSRP1P21291 193 aaKnown RBP12.79□□□□□ -0.36
SCNN1A-201ENST00000228916 RPS27AP62979 156 aaKnown RBP12.79□□□□□ -0.36
SCNN1A-201ENST00000228916 UBA52P62987 128 aaKnown RBP12.79□□□□□ -0.36
SCNN1A-201ENST00000228916 SORDQ00796 357 aa12.79□□□□□ -0.36
SCNN1A-201ENST00000228916 STK11Q15831 433 aa12.79□□□□□ -0.36
SCNN1A-201ENST00000228916 SLC35D3Q5M8T2 416 aa12.79□□□□□ -0.36
SCNN1A-201ENST00000228916 PLPP4Q5VZY2 271 aa12.79□□□□□ -0.36
SCNN1A-201ENST00000228916 USP53Q70EK8 1073 aa12.79□□□□□ -0.36
SCNN1A-201ENST00000228916 NPEPL1Q8NDH3 523 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms