RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 ACTA2P62736 377 aa16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 ACTG2P63267 376 aa16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 UBE2IP63279 158 aaKnown RBP16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 HYAL1Q12794 435 aa16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 GUCA2BQ16661 112 aa16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 NDUFAF6Q330K2 333 aa16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 PCGF3Q3KNV8 242 aa16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 DNM1P46Q6ZS02 220 aa16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 ZNF546Q86UE3 836 aa16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 GLB1L2Q8IW92 636 aa16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 OR4C6Q8NH72 309 aa16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 ZMYND19Q96E35 227 aaPredicted RBP16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 SLC35A4Q96G79 324 aa16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 MRGPRX3Q96LB0 322 aa16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 EPHA6Q9UF33 1036 aa16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 GNG8Q9UK08 70 aa16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 REV3LO60673 3130 aa16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 TRAV27A0A087WT01 109 aa16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 STATHP02808 62 aa16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 LUMP51884 338 aaPredicted RBP16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 TNFRSF17Q02223 184 aa16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 ILF3Q12906 894 aaKnown RBP eCLIP16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 OR2W3Q7Z3T1 314 aa16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 OR9A2Q8NGT5 310 aa16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 ADAT1Q9BUB4 502 aaKnown RBP16.22■□□□□ 0.19
CDKN1B-201ENST00000228872 A0A0D9SG52 128 aa16.21■□□□□ 0.19
CDKN1B-201ENST00000228872 K7ESM1 405 aa16.21■□□□□ 0.19
CDKN1B-201ENST00000228872 CTSLP07711 333 aa16.21■□□□□ 0.19
CDKN1B-201ENST00000228872 CISD3P0C7P0 127 aa16.21■□□□□ 0.19
CDKN1B-201ENST00000228872 HTR2AP28223 471 aa16.21■□□□□ 0.19
CDKN1B-201ENST00000228872 NDUFS1P28331 727 aa16.21■□□□□ 0.19
CDKN1B-201ENST00000228872 MAGEB1P43366 347 aa16.21■□□□□ 0.19
CDKN1B-201ENST00000228872 PPIAP62937 165 aaKnown RBP16.21■□□□□ 0.19
CDKN1B-201ENST00000228872 MANEAQ5SRI9 462 aa16.21■□□□□ 0.19
CDKN1B-201ENST00000228872 DCUN1D3Q8IWE4 304 aa16.21■□□□□ 0.19
CDKN1B-201ENST00000228872 RNF113BQ8IZP6 322 aaKnown RBP16.21■□□□□ 0.19
CDKN1B-201ENST00000228872 ASB13Q8WXK3 278 aa16.21■□□□□ 0.19
CDKN1B-201ENST00000228872 MIB2Q96AX9 1013 aa16.21■□□□□ 0.19
CDKN1B-201ENST00000228872 MS4A4EQ96PG1 132 aa16.21■□□□□ 0.19
CDKN1B-201ENST00000228872 OR52A5Q9H2C5 316 aa16.21■□□□□ 0.19
CDKN1B-201ENST00000228872 KLHL31Q9H511 634 aa16.21■□□□□ 0.19
CDKN1B-201ENST00000228872 ATG4BQ9Y4P1 393 aa16.21■□□□□ 0.19
CDKN1B-201ENST00000228872 CENPVL1A0A0U1RR11 272 aa16.21■□□□□ 0.18
CDKN1B-201ENST00000228872 CTNSO60931 367 aa16.21■□□□□ 0.18
CDKN1B-201ENST00000228872 TMIGD3P0DMS9 266 aaPredicted RBP16.21■□□□□ 0.18
CDKN1B-201ENST00000228872 CALCBP10092 127 aa16.21■□□□□ 0.18
CDKN1B-201ENST00000228872 ERGP11308 486 aa16.21■□□□□ 0.18
CDKN1B-201ENST00000228872 ADCYAP1P18509 176 aa16.21■□□□□ 0.18
CDKN1B-201ENST00000228872 CSNK2A2P19784 350 aaPredicted RBP16.21■□□□□ 0.18
CDKN1B-201ENST00000228872 SLC9A5Q14940 896 aa16.21■□□□□ 0.18
CDKN1B-201ENST00000228872 DHRS7BQ6IAN0 325 aaPredicted RBP16.21■□□□□ 0.18
CDKN1B-201ENST00000228872 ARMC10Q8N2F6 343 aa16.21■□□□□ 0.18
CDKN1B-201ENST00000228872 OR6N1Q8NGY5 312 aa16.21■□□□□ 0.18
CDKN1B-201ENST00000228872 C15orf40Q8WUR7 153 aa16.21■□□□□ 0.18
CDKN1B-201ENST00000228872 SFT2D1Q8WV19 159 aa16.21■□□□□ 0.18
CDKN1B-201ENST00000228872 SNX33Q8WV41 574 aa16.21■□□□□ 0.18
CDKN1B-201ENST00000228872 ACTRT3Q9BYD9 372 aa16.21■□□□□ 0.18
CDKN1B-201ENST00000228872 TMEM185BQ9H7F4 350 aa16.21■□□□□ 0.18
CDKN1B-201ENST00000228872 SLC27A6Q9Y2P4 619 aa16.21■□□□□ 0.18
CDKN1B-201ENST00000228872 GLSO94925 669 aaPredicted RBP16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 LYPD3O95274 346 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 IFNA4P05014 189 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 OR2T7P0C7T2 308 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 NAA10P41227 235 aaPredicted RBP16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 KCNJ3P48549 501 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 JMJD6Q6NYC1 403 aaPredicted RBP16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 KRT77Q7Z794 578 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 NRSN1Q8IZ57 195 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 KCNRGQ8N5I3 272 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 OR2T27Q8NH04 317 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 OR51A7Q8NH64 312 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 WFIKKN2Q8TEU8 576 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 BPIFA2Q96DR5 249 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 ZNF75AQ96N20 296 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 CMSS1Q9BQ75 279 aaKnown RBP16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 FAM117AQ9C073 453 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 FKRPQ9H9S5 495 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 PRDM9Q9NQV7 894 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 MYO10Q9HD67 2058 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 TP53BP1Q12888 1972 aaPredicted RBP16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 TCF20Q9UGU0 1960 aaKnown RBP16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 LRRK1Q38SD2 2015 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 LRIT2A6NDA9 550 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 C4orf51C9J302 202 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 H7C417 338 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 LINC01565O15544 149 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 GPRIN2O60269 458 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 RBBP9O75884 186 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 AIFM1O95831 613 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 FCARP24071 287 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 C4orf46Q504U0 113 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 TCEAL5Q5H9L2 206 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 TMPRSS11FQ6ZWK6 438 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 RANBP3LQ86VV4 465 aaPredicted RBP16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 TDHQ8IZJ6 230 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 C12orf45Q8N5I9 185 aaPredicted RBP16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 ADAMTS15Q8TE58 950 aa16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 LINC00615Q96LM1 132 aaPredicted RBP16.2■□□□□ 0.18
CDKN1B-201ENST00000228872 MRI1Q9BV20 369 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms