RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 FBXO42Q6P3S6 717 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 TSSK4Q6SA08 328 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 LINC00346Q8IVM7 164 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 GLB1L2Q8IW92 636 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 CMTM4Q8IZR5 234 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 TOR1AIP2Q8NFQ8 470 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 OR2T27Q8NH04 317 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 DCLRE1CQ96SD1 692 aaKnown RBP12.68□□□□□ -0.38
NFKB1-201ENST00000226574 ABHD1Q96SE0 405 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 BTBD2Q9BX70 525 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 FBXO34Q9NWN3 711 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 COL5A3P25940 1745 aaPredicted RBP12.68□□□□□ -0.38
NFKB1-201ENST00000226574 ABCA3Q99758 1704 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 MED12Q93074 2177 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 CCDC163A0A0D9SF12 145 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 IDSB3KWA1 339 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 SURF4O15260 269 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 PRAF2O60831 178 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 RAF1P04049 648 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 RFX2P48378 723 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 ZNF585AQ6P3V2 769 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 NIPAL3Q6P499 406 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 MCATQ8IVS2 390 aaKnown RBP12.68□□□□□ -0.38
NFKB1-201ENST00000226574 OR4C15Q8NGM1 316 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 GPA33Q99795 319 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 VN1R3Q9BXE9 311 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 NCDNQ9UBB6 729 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 PLEKHB1Q9UF11 243 aaPredicted RBP12.68□□□□□ -0.38
NFKB1-201ENST00000226574 ADAM29Q9UKF5 820 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 RHBDD3Q9Y3P4 386 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 CNOT1A5YKK6 2376 aaKnown RBP12.68□□□□□ -0.38
NFKB1-201ENST00000226574 B8ZZF3 427 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 MAOAP21397 527 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 TM4SF4P48230 202 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 MEP1BQ16820 701 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 KIAA1958Q8N8K9 716 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 FAM174AQ8TBP5 190 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 ST8SIA2Q92186 375 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 WFDC6Q9BQY6 131 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 MED17Q9NVC6 651 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 MEMO1Q9Y316 297 aa12.68□□□□□ -0.38
NFKB1-201ENST00000226574 PLA2G10O15496 165 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 SYT7O43581 403 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 PRAMEF2O60811 474 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 ZNF14P17017 642 aaPredicted RBP12.67□□□□□ -0.38
NFKB1-201ENST00000226574 ENDOUP21128 410 aaKnown RBP12.67□□□□□ -0.38
NFKB1-201ENST00000226574 PRPH2P23942 346 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 AGTR1P30556 359 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 CLDN20P56880 219 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 MAMDC2Q7Z304 686 aaPredicted RBP12.67□□□□□ -0.38
NFKB1-201ENST00000226574 C17orf47Q8NEP4 570 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 KIAA1143Q96AT1 154 aaPredicted RBP12.67□□□□□ -0.38
NFKB1-201ENST00000226574 ZBP1Q9H171 429 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 MIXL1Q9H2W2 232 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 B3GAT2Q9NPZ5 323 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 SERINC1Q9NRX5 453 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 RABL2BQ9UNT1 228 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 CAMK2AQ9UQM7 478 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 RPH3AQ9Y2J0 694 aaPredicted RBP12.67□□□□□ -0.38
NFKB1-201ENST00000226574 F5H5K5 113 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 ZNF593O00488 134 aaPredicted RBP12.67□□□□□ -0.38
NFKB1-201ENST00000226574 RGS19P49795 217 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 FXYD4P59646 89 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 MELKQ14680 651 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 STEAP2Q8NFT2 490 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 PARP12Q9H0J9 701 aaKnown RBP12.67□□□□□ -0.38
NFKB1-201ENST00000226574 C14orf166Q9Y224 244 aaKnown RBP12.67□□□□□ -0.38
NFKB1-201ENST00000226574 IGLV3-16A0A075B6K0 115 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 TMEM269A0A1B0GVZ9 245 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 CDC42EP2O14613 210 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 SLC2A1P11166 492 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 NID1P14543 1247 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 HNRNPA2B1P22626 353 aaKnown RBP12.67□□□□□ -0.38
NFKB1-201ENST00000226574 CCR9P51686 369 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 LUMP51884 338 aaPredicted RBP12.67□□□□□ -0.38
NFKB1-201ENST00000226574 CHRFAM7AQ494W8 412 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 ZNF547Q8IVP9 402 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 SLC35F3Q8IY50 421 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 OR1E3Q8WZA6 343 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 SPACA5Q96QH8 159 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 B3GNT2Q9NY97 397 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 DHCR7Q9UBM7 475 aaKnown RBP12.67□□□□□ -0.38
NFKB1-201ENST00000226574 PIAS3Q9Y6X2 628 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 ATAD5Q96QE3 1844 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 A0A0B4J2A0 478 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 NPC1O15118 1278 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 UBL4AP11441 157 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 ZNF250P15622 560 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 TACR3P29371 465 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 S100A11P31949 105 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 MRPL19P49406 292 aaKnown RBP12.67□□□□□ -0.38
NFKB1-201ENST00000226574 PRMT2P55345 433 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 ZNF169Q14929 603 aaPredicted RBP12.67□□□□□ -0.38
NFKB1-201ENST00000226574 GLYATL3Q5SZD4 288 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 C12orf73Q69YU5 71 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 OR4N2Q8NGD1 307 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 OR13C9Q8NGT0 318 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 MFSD8Q8NHS3 518 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 OR1F2PQ96R84 312 aa12.67□□□□□ -0.38
NFKB1-201ENST00000226574 LRIT1Q9P2V4 623 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms