RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 AMY2AP04746 511 aa13.51□□□□□ -0.25
PTPRA-201ENST00000216877 DDTP30046 118 aa13.51□□□□□ -0.25
PTPRA-201ENST00000216877 RPP30P78346 268 aaKnown RBP13.51□□□□□ -0.25
PTPRA-201ENST00000216877 TSPAN31Q12999 210 aa13.51□□□□□ -0.25
PTPRA-201ENST00000216877 ASPGQ86U10 573 aa13.51□□□□□ -0.25
PTPRA-201ENST00000216877 GLB1L2Q8IW92 636 aa13.51□□□□□ -0.25
PTPRA-201ENST00000216877 SECTM1Q8WVN6 248 aa13.51□□□□□ -0.25
PTPRA-201ENST00000216877 TMEM159Q96B96 161 aa13.51□□□□□ -0.25
PTPRA-201ENST00000216877 THOC3Q96J01 351 aaKnown RBP13.51□□□□□ -0.25
PTPRA-201ENST00000216877 SLC35G5Q96KT7 338 aa13.51□□□□□ -0.25
PTPRA-201ENST00000216877 MRPS23Q9Y3D9 190 aaKnown RBP13.51□□□□□ -0.25
PTPRA-201ENST00000216877 GPR32O75388 356 aa13.51□□□□□ -0.25
PTPRA-201ENST00000216877 EPCAMP16422 314 aa13.51□□□□□ -0.25
PTPRA-201ENST00000216877 TAS2R20P59543 309 aa13.51□□□□□ -0.25
PTPRA-201ENST00000216877 MRPS10P82664 201 aaKnown RBP13.51□□□□□ -0.25
PTPRA-201ENST00000216877 SHC2P98077 582 aa13.51□□□□□ -0.25
PTPRA-201ENST00000216877 RING1Q06587 406 aa13.51□□□□□ -0.25
PTPRA-201ENST00000216877 ELAVL2Q12926 359 aaKnown RBP13.51□□□□□ -0.25
PTPRA-201ENST00000216877 GRB14Q14449 540 aa13.51□□□□□ -0.25
PTPRA-201ENST00000216877 PRSS53Q2L4Q9 553 aa13.51□□□□□ -0.25
PTPRA-201ENST00000216877 ZNF792Q3KQV3 632 aa13.51□□□□□ -0.25
PTPRA-201ENST00000216877 LDLRAD1Q5T700 205 aa13.51□□□□□ -0.25
PTPRA-201ENST00000216877 ACOT7LQ6ZUV0 252 aa13.51□□□□□ -0.25
PTPRA-201ENST00000216877 ASB11Q8WXH4 323 aa13.51□□□□□ -0.25
PTPRA-201ENST00000216877 SLC25A38Q96DW6 304 aa13.51□□□□□ -0.25
PTPRA-201ENST00000216877 JSRP1Q96MG2 331 aaPredicted RBP13.51□□□□□ -0.25
PTPRA-201ENST00000216877 ELF4Q99607 663 aaPredicted RBP13.51□□□□□ -0.25
PTPRA-201ENST00000216877 FAM117AQ9C073 453 aa13.51□□□□□ -0.25
PTPRA-201ENST00000216877 EIF5A2Q9GZV4 153 aaKnown RBP13.51□□□□□ -0.25
PTPRA-201ENST00000216877 SMOC1Q9H4F8 434 aa13.51□□□□□ -0.25
PTPRA-201ENST00000216877 SEBOXQ9HB31 216 aaPredicted RBP13.51□□□□□ -0.25
PTPRA-201ENST00000216877 GKN1Q9NS71 199 aa13.51□□□□□ -0.25
PTPRA-201ENST00000216877 TRAV14DV4A0A0A6YYC5 116 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 ANKRD20A5PA0PJZ0 165 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 ARL5CA6NH57 179 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 RAB5AP20339 215 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 ELFN2Q5R3F8 820 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 MEPCEQ7L2J0 689 aaKnown RBP13.5□□□□□ -0.25
PTPRA-201ENST00000216877 KCNRGQ8N5I3 272 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 OR2G2Q8NGZ5 317 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 ALX4Q9H161 411 aaPredicted RBP13.5□□□□□ -0.25
PTPRA-201ENST00000216877 OR2F2O95006 317 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 PJVKQ0ZLH3 352 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 OR2F1Q13607 317 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 C11orf87Q6NUJ2 197 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 ZNF836Q6ZNA1 936 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 MAMDC2Q7Z304 686 aaPredicted RBP13.5□□□□□ -0.25
PTPRA-201ENST00000216877 C19orf43Q9BQ61 176 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 TRMT61BQ9BVS5 477 aaKnown RBP13.5□□□□□ -0.25
PTPRA-201ENST00000216877 FBXO44Q9H4M3 255 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 SEMA4GQ9NTN9 838 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 ZNF223Q9UK11 482 aaPredicted RBP13.5□□□□□ -0.25
PTPRA-201ENST00000216877 TRPV2Q9Y5S1 764 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 A0A1W2PPE2 198 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 ZNF705GA8MUZ8 300 aaPredicted RBP13.5□□□□□ -0.25
PTPRA-201ENST00000216877 DCTN6O00399 190 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 RPN2P04844 631 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 QDPRP09417 244 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 C1GALT1C1LP0DN25 315 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 CASRP41180 1078 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 ID4P47928 161 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 MRPS6P82932 125 aaKnown RBP13.5□□□□□ -0.25
PTPRA-201ENST00000216877 CAP1Q01518 475 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 CTXN3Q4LDR2 81 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 OR2A2Q6IF42 318 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 ZNF627Q7L945 461 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 LILRA3Q8N6C8 439 aaPredicted RBP13.5□□□□□ -0.25
PTPRA-201ENST00000216877 C15orf54Q8N8G6 183 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 PCSK9Q8NBP7 692 aaKnown RBP13.5□□□□□ -0.25
PTPRA-201ENST00000216877 OR4A4PQ8NGN8 299 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 RSPO3Q9BXY4 272 aaPredicted RBP13.5□□□□□ -0.25
PTPRA-201ENST00000216877 UBQLN3Q9H347 655 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 APMAPQ9HDC9 416 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 KLHL28Q9NXS3 571 aa13.5□□□□□ -0.25
PTPRA-201ENST00000216877 A0A1B0GVT2 93 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 OR4E1P0C645 316 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 ST3GAL3Q11203 375 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 OR8G1Q15617 311 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 C14orf28Q4W4Y0 310 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 NRROSQ86YC3 692 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 FRMD1Q8N878 549 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 ACBD4Q8NC06 268 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 OR6K6Q8NGW6 343 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 WFIKKN2Q8TEU8 576 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 TMEM255BQ8WV15 326 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 NKD1Q969G9 470 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 PRRC1Q96M27 445 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 MRPS18AQ9NVS2 196 aaKnown RBP13.49□□□□□ -0.25
PTPRA-201ENST00000216877 ZNF236Q9UL36 1845 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 GSTZ1O43708 216 aaPredicted RBP13.49□□□□□ -0.25
PTPRA-201ENST00000216877 CATP04040 527 aaKnown RBP13.49□□□□□ -0.25
PTPRA-201ENST00000216877 COX5BP10606 129 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 PRPH2P23942 346 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 ENTPD8Q5MY95 495 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 GAREM2Q75VX8 874 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 CD163Q86VB7 1156 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 VRK2Q86Y07 508 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 BAP18Q8IXM2 172 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 LINC01465Q8N7H1 131 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 OR1J2Q8NGS2 313 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms