RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 TACO1Q9BSH4 297 aaKnown RBP19.28■□□□□ 0.68
SCN1B-206ENST00000638536 SELENONQ9NZV5 590 aa19.28■□□□□ 0.68
SCN1B-206ENST00000638536 TESMINQ9Y4I5 508 aa19.28■□□□□ 0.68
SCN1B-206ENST00000638536 MYO9AB2RTY4 2548 aa19.27■□□□□ 0.68
SCN1B-206ENST00000638536 TRAV36DV7A0A075B6V5 113 aa19.27■□□□□ 0.68
SCN1B-206ENST00000638536 FAM221AA4D161 298 aa19.27■□□□□ 0.68
SCN1B-206ENST00000638536 TRAPPC13A5PLN9 417 aa19.27■□□□□ 0.68
SCN1B-206ENST00000638536 SIAH2O43255 324 aa19.27■□□□□ 0.68
SCN1B-206ENST00000638536 CTAG2O75638 210 aa19.27■□□□□ 0.68
SCN1B-206ENST00000638536 ADAP00813 363 aa19.27■□□□□ 0.68
SCN1B-206ENST00000638536 SERPINA1P01009 418 aa19.27■□□□□ 0.68
SCN1B-206ENST00000638536 BGLAPP02818 100 aa19.27■□□□□ 0.68
SCN1B-206ENST00000638536 GRPRP30550 384 aa19.27■□□□□ 0.68
SCN1B-206ENST00000638536 SWT1Q5T5J6 900 aaKnown RBP19.27■□□□□ 0.68
SCN1B-206ENST00000638536 TMEM225Q6GV28 225 aa19.27■□□□□ 0.68
SCN1B-206ENST00000638536 CBLL1Q75N03 491 aa19.27■□□□□ 0.68
SCN1B-206ENST00000638536 OR9K2Q8NGE7 335 aa19.27■□□□□ 0.68
SCN1B-206ENST00000638536 SLC41A3Q96GZ6 507 aa19.27■□□□□ 0.68
SCN1B-206ENST00000638536 ZC3HAV1LQ96H79 300 aaKnown RBP19.27■□□□□ 0.68
SCN1B-206ENST00000638536 DACH2Q96NX9 599 aa19.27■□□□□ 0.68
SCN1B-206ENST00000638536 SLC24A3Q9HC58 644 aa19.27■□□□□ 0.68
SCN1B-206ENST00000638536 EMC3Q9P0I2 261 aa19.27■□□□□ 0.68
SCN1B-206ENST00000638536 CD300AQ9UGN4 299 aa19.27■□□□□ 0.68
SCN1B-206ENST00000638536 A6NNC1 897 aa19.26■□□□□ 0.67
SCN1B-206ENST00000638536 M0R082 166 aa19.26■□□□□ 0.67
SCN1B-206ENST00000638536 ZNF682O95780 498 aa19.26■□□□□ 0.67
SCN1B-206ENST00000638536 THBDP07204 575 aa19.26■□□□□ 0.67
SCN1B-206ENST00000638536 YAP1P46937 504 aaKnown RBP19.26■□□□□ 0.67
SCN1B-206ENST00000638536 FOXG1P55316 489 aaPredicted RBP19.26■□□□□ 0.67
SCN1B-206ENST00000638536 NKAIN4Q8IVV8 208 aa19.26■□□□□ 0.67
SCN1B-206ENST00000638536 ZNF100Q8IYN0 542 aa19.26■□□□□ 0.67
SCN1B-206ENST00000638536 DEFB107AQ8IZN7 70 aa19.26■□□□□ 0.67
SCN1B-206ENST00000638536 ZNF417Q8TAU3 575 aa19.26■□□□□ 0.67
SCN1B-206ENST00000638536 BCAS4Q8TDM0 211 aa19.26■□□□□ 0.67
SCN1B-206ENST00000638536 ZNF587Q96SQ5 575 aaPredicted RBP19.26■□□□□ 0.67
SCN1B-206ENST00000638536 TMEM43Q9BTV4 400 aa19.26■□□□□ 0.67
SCN1B-206ENST00000638536 AMBRA1Q9C0C7 1298 aa19.26■□□□□ 0.67
SCN1B-206ENST00000638536 B3GAT1Q9P2W7 334 aa19.26■□□□□ 0.67
SCN1B-206ENST00000638536 J3KTA2 159 aa19.25■□□□□ 0.67
SCN1B-206ENST00000638536 NDUFAB1O14561 156 aa19.25■□□□□ 0.67
SCN1B-206ENST00000638536 GPR171O14626 319 aa19.25■□□□□ 0.67
SCN1B-206ENST00000638536 DAZAP2Q15038 168 aaPredicted RBP19.25■□□□□ 0.67
SCN1B-206ENST00000638536 GLYATQ6IB77 296 aa19.25■□□□□ 0.67
SCN1B-206ENST00000638536 EPHX4Q8IUS5 362 aa19.25■□□□□ 0.67
SCN1B-206ENST00000638536 NRGNQ92686 78 aa19.25■□□□□ 0.67
SCN1B-206ENST00000638536 FAM162AQ96A26 154 aa19.25■□□□□ 0.67
SCN1B-206ENST00000638536 NSL1Q96IY1 281 aa19.25■□□□□ 0.67
SCN1B-206ENST00000638536 LURAP1Q96LR2 239 aa19.25■□□□□ 0.67
SCN1B-206ENST00000638536 ZNF426Q9BUY5 554 aa19.25■□□□□ 0.67
SCN1B-206ENST00000638536 NDRG3Q9UGV2 375 aa19.25■□□□□ 0.67
SCN1B-206ENST00000638536 KPNA4O00629 521 aaPredicted RBP19.25■□□□□ 0.67
SCN1B-206ENST00000638536 OR2T1O43869 369 aa19.25■□□□□ 0.67
SCN1B-206ENST00000638536 MRPL33O75394 65 aaKnown RBP19.25■□□□□ 0.67
SCN1B-206ENST00000638536 PSMB1P20618 241 aaKnown RBP19.25■□□□□ 0.67
SCN1B-206ENST00000638536 IGHV1-2P23083 117 aa19.25■□□□□ 0.67
SCN1B-206ENST00000638536 POU4F3Q15319 338 aa19.25■□□□□ 0.67
SCN1B-206ENST00000638536 C5orf46Q6UWT4 87 aa19.25■□□□□ 0.67
SCN1B-206ENST00000638536 Q6ZT83 130 aa19.25■□□□□ 0.67
SCN1B-206ENST00000638536 TSEN54Q7Z6J9 526 aaKnown RBP19.25■□□□□ 0.67
SCN1B-206ENST00000638536 TMEM200AQ86VY9 491 aa19.25■□□□□ 0.67
SCN1B-206ENST00000638536 APH1AQ96BI3 265 aa19.25■□□□□ 0.67
SCN1B-206ENST00000638536 HSH2DQ96JZ2 352 aa19.25■□□□□ 0.67
SCN1B-206ENST00000638536 MED18Q9BUE0 208 aa19.25■□□□□ 0.67
SCN1B-206ENST00000638536 SF3B5Q9BWJ5 86 aaKnown RBP19.25■□□□□ 0.67
SCN1B-206ENST00000638536 MEPEQ9NQ76 525 aaPredicted RBP19.25■□□□□ 0.67
SCN1B-206ENST00000638536 RIMS3Q9UJD0 308 aa19.25■□□□□ 0.67
SCN1B-206ENST00000638536 A4GNTQ9UNA3 340 aa19.25■□□□□ 0.67
SCN1B-206ENST00000638536 VPS13CQ709C8 3753 aa19.24■□□□□ 0.67
SCN1B-206ENST00000638536 A0A1W2PPR1 153 aa19.24■□□□□ 0.67
SCN1B-206ENST00000638536 B2RBV5 119 aa19.24■□□□□ 0.67
SCN1B-206ENST00000638536 MS4A18H0YCH9 400 aa19.24■□□□□ 0.67
SCN1B-206ENST00000638536 LYZL6O75951 148 aa19.24■□□□□ 0.67
SCN1B-206ENST00000638536 HPRP00739 348 aa19.24■□□□□ 0.67
SCN1B-206ENST00000638536 TAS2R41P59536 307 aa19.24■□□□□ 0.67
SCN1B-206ENST00000638536 LSM11P83369 360 aaKnown RBP eCLIP19.24■□□□□ 0.67
SCN1B-206ENST00000638536 MXRA7P84157 204 aa19.24■□□□□ 0.67
SCN1B-206ENST00000638536 MS4A18Q3C1V0 323 aa19.24■□□□□ 0.67
SCN1B-206ENST00000638536 SFRP5Q5T4F7 317 aa19.24■□□□□ 0.67
SCN1B-206ENST00000638536 CASP12Q6UXS9 341 aa19.24■□□□□ 0.67
SCN1B-206ENST00000638536 RINLQ6ZS11 566 aa19.24■□□□□ 0.67
SCN1B-206ENST00000638536 CREB3L2Q70SY1 520 aa19.24■□□□□ 0.67
SCN1B-206ENST00000638536 FAM86B1Q8N7N1 296 aa19.24■□□□□ 0.67
SCN1B-206ENST00000638536 TMEM255BQ8WV15 326 aa19.24■□□□□ 0.67
SCN1B-206ENST00000638536 S100PBPQ96BU1 408 aa19.24■□□□□ 0.67
SCN1B-206ENST00000638536 ACTR6Q9GZN1 396 aa19.24■□□□□ 0.67
SCN1B-206ENST00000638536 RASSF1Q9NS23 344 aa19.24■□□□□ 0.67
SCN1B-206ENST00000638536 C6orf203Q9P0P8 240 aaPredicted RBP19.24■□□□□ 0.67
SCN1B-206ENST00000638536 FFAR1O14842 300 aa19.23■□□□□ 0.67
SCN1B-206ENST00000638536 HLA-DOBP13765 273 aa19.23■□□□□ 0.67
SCN1B-206ENST00000638536 HSD17B1P14061 328 aa19.23■□□□□ 0.67
SCN1B-206ENST00000638536 LGALS3BPQ08380 585 aa19.23■□□□□ 0.67
SCN1B-206ENST00000638536 FXNQ16595 210 aa19.23■□□□□ 0.67
SCN1B-206ENST00000638536 TSPO2Q5TGU0 170 aa19.23■□□□□ 0.67
SCN1B-206ENST00000638536 LRRC17Q8N6Y2 441 aa19.23■□□□□ 0.67
SCN1B-206ENST00000638536 LZICQ8WZA0 190 aa19.23■□□□□ 0.67
SCN1B-206ENST00000638536 SLC7A10Q9NS82 523 aa19.23■□□□□ 0.67
SCN1B-206ENST00000638536 RHCGQ9UBD6 479 aa19.23■□□□□ 0.67
SCN1B-206ENST00000638536 RASD1Q9Y272 281 aa19.23■□□□□ 0.67
SCN1B-206ENST00000638536 GPR52Q9Y2T5 361 aa19.23■□□□□ 0.67
SCN1B-206ENST00000638536 GTF2E2P29084 291 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms