RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 STACQ99469 402 aa13.6□□□□□ -0.23
CACNA1A-220ENST00000635988 TCF7L1Q9HCS4 588 aa13.6□□□□□ -0.23
CACNA1A-220ENST00000635988 PRDM9Q9NQV7 894 aa13.6□□□□□ -0.23
CACNA1A-220ENST00000635988 USP36Q9P275 1121 aaKnown RBP13.6□□□□□ -0.23
CACNA1A-220ENST00000635988 CYB5R1Q9UHQ9 305 aa13.6□□□□□ -0.23
CACNA1A-220ENST00000635988 ABT1Q9ULW3 272 aaKnown RBP13.6□□□□□ -0.23
CACNA1A-220ENST00000635988 A0A0B4J2E0 115 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 A0A1B0GX12 115 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 SYNDIG1LA6NDD5 238 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 CHURC1-FNTBB4DL54 471 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 GLSO94925 669 aaPredicted RBP13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 CSF1P09603 554 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 VSIG10L2P0DP72 767 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 ZNF35P13682 527 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 TLX1P31314 330 aaPredicted RBP13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 PSMB10P40306 273 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 SLC6A19Q695T7 634 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 ZCCHC12Q6PEW1 402 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 CDRT4Q8N9R6 151 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 PXT1Q8NFP0 134 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 OR52E1Q8NGJ3 308 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 ZDHHC1Q8WTX9 485 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 MARC2Q969Z3 335 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 WDR89Q96FK6 387 aaPredicted RBP13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 ZNF426Q9BUY5 554 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 MFFQ9GZY8 342 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 POLE3Q9NRF9 147 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 PRELID3BQ9Y3B1 194 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 C1QTNF3-AMACRE9PGA6 284 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 H7C417 338 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 PEX12O00623 359 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 PRAMEF2O60811 474 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 UBBP0CG47 229 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 UBCP0CG48 685 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 NAT2P11245 290 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 HIST1H1CP16403 213 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 CLDN12P56749 244 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 RPS27AP62979 156 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 UBA52P62987 128 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 EXOSC6Q5RKV6 272 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 ZNF425Q6IV72 752 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 USP53Q70EK8 1073 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 OR52B4Q8NGK2 314 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 OR6N1Q8NGY5 312 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 GRHL3Q8TE85 626 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 HDAC8Q9BY41 377 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 EXOSC3Q9NQT5 275 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 MTFP1Q9UDX5 166 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 KCNE5Q9UJ90 142 aa13.59□□□□□ -0.23
CACNA1A-220ENST00000635988 DNASE2O00115 360 aaPredicted RBP13.58□□□□□ -0.23
CACNA1A-220ENST00000635988 GOSR2O14653 212 aa13.58□□□□□ -0.23
CACNA1A-220ENST00000635988 CXCL14O95715 111 aa13.58□□□□□ -0.23
CACNA1A-220ENST00000635988 P2RY2P41231 377 aa13.58□□□□□ -0.23
CACNA1A-220ENST00000635988 RPE65Q16518 533 aa13.58□□□□□ -0.23
CACNA1A-220ENST00000635988 TSSK4Q6SA08 328 aa13.58□□□□□ -0.23
CACNA1A-220ENST00000635988 STAC2Q6ZMT1 411 aa13.58□□□□□ -0.23
CACNA1A-220ENST00000635988 DGLUCYQ7Z3D6 616 aa13.58□□□□□ -0.23
CACNA1A-220ENST00000635988 TMEM17Q86X19 198 aa13.58□□□□□ -0.23
CACNA1A-220ENST00000635988 DND1Q8IYX4 353 aaKnown RBP13.58□□□□□ -0.23
CACNA1A-220ENST00000635988 TNFAIP8L1Q8WVP5 186 aa13.58□□□□□ -0.23
CACNA1A-220ENST00000635988 TIMM29Q9BSF4 260 aa13.58□□□□□ -0.23
CACNA1A-220ENST00000635988 TEX101Q9BY14 249 aa13.58□□□□□ -0.23
CACNA1A-220ENST00000635988 A0A087WV62 115 aa13.58□□□□□ -0.24
CACNA1A-220ENST00000635988 CDC123O75794 336 aaPredicted RBP13.58□□□□□ -0.24
CACNA1A-220ENST00000635988 ADH1CP00326 375 aa13.58□□□□□ -0.24
CACNA1A-220ENST00000635988 RLN1P04808 185 aa13.58□□□□□ -0.24
CACNA1A-220ENST00000635988 INHAP05111 366 aa13.58□□□□□ -0.24
CACNA1A-220ENST00000635988 CPMP14384 443 aa13.58□□□□□ -0.24
CACNA1A-220ENST00000635988 MPGP29372 298 aa13.58□□□□□ -0.24
CACNA1A-220ENST00000635988 AGTR1P30556 359 aa13.58□□□□□ -0.24
CACNA1A-220ENST00000635988 ERVFC1P60507 584 aa13.58□□□□□ -0.24
CACNA1A-220ENST00000635988 FHL1Q13642 323 aa13.58□□□□□ -0.24
CACNA1A-220ENST00000635988 COL9A2Q14055 689 aaPredicted RBP13.58□□□□□ -0.24
CACNA1A-220ENST00000635988 IRF4Q15306 451 aa13.58□□□□□ -0.24
CACNA1A-220ENST00000635988 PCGF3Q3KNV8 242 aa13.58□□□□□ -0.24
CACNA1A-220ENST00000635988 NXPE3Q969Y0 559 aa13.58□□□□□ -0.24
CACNA1A-220ENST00000635988 HSPA12BQ96MM6 686 aa13.58□□□□□ -0.24
CACNA1A-220ENST00000635988 NPAS1Q99742 590 aa13.58□□□□□ -0.24
CACNA1A-220ENST00000635988 TRIM2Q9C040 744 aa13.58□□□□□ -0.24
CACNA1A-220ENST00000635988 ADAP2Q9NPF8 381 aa13.58□□□□□ -0.24
CACNA1A-220ENST00000635988 C2orf42Q9NWW7 574 aa13.58□□□□□ -0.24
CACNA1A-220ENST00000635988 ZMAT5Q9UDW3 170 aaKnown RBP13.58□□□□□ -0.24
CACNA1A-220ENST00000635988 A0A1B0GWA3 101 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 XRCC3O43542 346 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 FGF18O76093 207 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 KDM4BO94953 1096 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 SIX6O95475 246 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 RHOP08100 348 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 TACSTD2P09758 323 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 MGMTP16455 207 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 RPS15AP62244 130 aaKnown RBP13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 Q499Y3 187 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 C11orf88Q6PI97 169 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 ANKRD33Q7Z3H0 272 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 OR51L1Q8NGJ5 315 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 RBM18Q96H35 190 aaKnown RBP13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 SERINC2Q96SA4 455 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 PLCL2Q9UPR0 1127 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 IER3IP1Q9Y5U9 82 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 A0A0D9SG52 128 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms