RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 DCDC1P59894 354 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 SNRPEP62304 92 aaKnown RBP2.6□□□□□ -1.99
PSPC1-208ENST00000635562 RBX1P62877 108 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 PSPHP78330 225 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 MRPS22P82650 360 aaKnown RBP2.6□□□□□ -1.99
PSPC1-208ENST00000635562 DHODHQ02127 395 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 GUCY2DQ02846 1103 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 CKAP4Q07065 602 aaKnown RBP2.6□□□□□ -1.99
PSPC1-208ENST00000635562 CRYZQ08257 329 aaKnown RBP2.6□□□□□ -1.99
PSPC1-208ENST00000635562 ZP4Q12836 540 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 ILF3Q12906 894 aaKnown RBP eCLIP2.6□□□□□ -1.993e-6■■■□□ 18.5
PSPC1-208ENST00000635562 C1orf61Q13536 156 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 GRB7Q14451 532 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 ARL6IP1Q15041 203 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 LTB4RQ15722 352 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 TOMM34Q15785 309 aaPredicted RBP2.6□□□□□ -1.99
PSPC1-208ENST00000635562 KCTD19Q17RG1 926 aaPredicted RBP2.6□□□□□ -1.99
PSPC1-208ENST00000635562 TRIM16LQ309B1 348 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 DEFB115Q30KQ5 88 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 HLA-BQ31612 363 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 CT45A2Q5DJT8 189 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 GCSAMLQ5JQS6 135 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 ACER2Q5QJU3 275 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 AGAP7PQ5VUJ5 663 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 FRG2Q64ET8 278 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 TCEAL6Q6IPX3 200 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 RGMBQ6NW40 437 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 DNM1P34Q6PK57 102 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 C5orf46Q6UWT4 87 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 UNQ6126/PRO20091Q6UXV3 157 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 CCNI2Q6ZMN8 369 aaPredicted RBP2.6□□□□□ -1.99
PSPC1-208ENST00000635562 ZNF841Q6ZN19 808 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 ABHD13Q7L211 337 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 GOLGA7Q7Z5G4 137 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 TMPRSS11BQ86T26 416 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 CCDC190Q86UF4 302 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 NT5DC3Q86UY8 548 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 GPBP1Q86WP2 473 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 BBS7Q8IWZ6 715 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 SPAG16Q8N0X2 631 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 PGAM4Q8N0Y7 254 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 PUSL1Q8N0Z8 303 aaKnown RBP2.6□□□□□ -1.99
PSPC1-208ENST00000635562 CLIP4Q8N3C7 705 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 METTL4Q8N3J2 472 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 STPG2Q8N412 459 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 BMPERQ8N8U9 685 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 PPFIBP2Q8ND30 876 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 CCDC54Q8NEL0 328 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 NFAM1Q8NET5 270 aaPredicted RBP2.6□□□□□ -1.99
PSPC1-208ENST00000635562 OR2L5Q8NG80 312 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 OR4A4PQ8NGN8 299 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 OR13C5Q8NGS8 318 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 OR9A4Q8NGU2 314 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 OR4Q3Q8NH05 313 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 OR52I2Q8NH67 350 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 OR1F12Q8NHA8 337 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 NANPQ8TBE9 248 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 CA5BP1Q8WTZ4 195 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 MAFIPQ8WZ33 124 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 PTH2Q96A98 100 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 PPWD1Q96BP3 646 aaKnown RBP2.6□□□□□ -1.99
PSPC1-208ENST00000635562 CMTM5Q96DZ9 223 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 TCEAL4Q96EI5 215 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 SGTBQ96EQ0 304 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 FAM210BQ96KR6 192 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 AGAP4Q96P64 663 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 GFI1Q99684 422 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 SEC22CQ9BRL7 303 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 TIMM29Q9BSF4 260 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 ZNF2Q9BSG1 426 aaPredicted RBP2.6□□□□□ -1.99
PSPC1-208ENST00000635562 SLC25A33Q9BSK2 321 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 FEM1AQ9BSK4 669 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 RAB11FIP5Q9BXF6 653 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 LRRC2Q9BYS8 371 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 TMEM39BQ9GZU3 492 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 PCBD2Q9H0N5 130 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 RBM38Q9H0Z9 239 aaKnown RBP2.6□□□□□ -1.99
PSPC1-208ENST00000635562 ANKRD19PQ9H560 264 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 KAT8Q9H7Z6 458 aaKnown RBP2.6□□□□□ -1.99
PSPC1-208ENST00000635562 MARCH7Q9H992 704 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 PLEKHA1Q9HB21 404 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 Q9N2K0 584 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 FBXO8Q9NRD0 319 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 ABCC13Q9NSE7 274 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 ACSS1Q9NUB1 689 aaPredicted RBP2.6□□□□□ -1.99
PSPC1-208ENST00000635562 C1orf109Q9NX04 203 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 GPR83Q9NYM4 423 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 TMEM9Q9P0T7 183 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 GNG12Q9UBI6 72 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 OR14J1Q9UGF5 321 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 NDRG2Q9UN36 371 aaKnown RBP2.6□□□□□ -1.99
PSPC1-208ENST00000635562 DIMT1Q9UNQ2 313 aaKnown RBP2.6□□□□□ -1.99
PSPC1-208ENST00000635562 RNF6Q9Y252 685 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 TMED7Q9Y3B3 224 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 NUBP2Q9Y5Y2 271 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 ALG6Q9Y672 507 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 SLC22A7Q9Y694 548 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 CDH10Q9Y6N8 788 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 SPEF2Q9C093 1822 aa2.6□□□□□ -1.99
PSPC1-208ENST00000635562 CEMIPQ8WUJ3 1361 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms