RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 ZNF232Q9UNY5 417 aa8.13□□□□□ -1.11
TARDBP-227ENST00000622057 GPR45Q9Y5Y3 372 aa8.13□□□□□ -1.11
TARDBP-227ENST00000622057 FKBP7Q9Y680 259 aa8.13□□□□□ -1.11
TARDBP-227ENST00000622057 SONP18583 2426 aaKnown RBP8.13□□□□□ -1.11
TARDBP-227ENST00000622057 LOC100289279A0A1B0GTE1 492 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 SLC35F4A4IF30 521 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 ZNF587BE7ETH6 402 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 VAMP5O95183 116 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 CRYAAP02489 173 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 BCHEP06276 602 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 TFPTP0C1Z6 253 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 PRG2P13727 222 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 SERPINF1P36955 418 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 NR4A2P43354 598 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 P2RY4P51582 365 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 CRISP3P54108 245 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 RPS26P11Q5JNZ5 115 aaPredicted RBP8.12□□□□□ -1.11
TARDBP-227ENST00000622057 CEP85LQ5SZL2 805 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 HHATQ5VTY9 493 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 C1orf140Q5VVS0 124 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 PRAMEF8Q5VWM4 474 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 PRAMEF7Q5VXH5 474 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 FAM166AQ6J272 317 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 WDR93Q6P2C0 686 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 ANKRD16Q6P6B7 361 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 SLC46A3Q7Z3Q1 461 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 ALKBH3Q96Q83 286 aaPredicted RBP8.12□□□□□ -1.11
TARDBP-227ENST00000622057 PIF1Q9H611 641 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 CACYBPQ9HB71 228 aaKnown RBP8.12□□□□□ -1.11
TARDBP-227ENST00000622057 OBP2BQ9NPH6 170 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 CA10Q9NS85 328 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 SLC6A13Q9NSD5 602 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 CALML5Q9NZT1 146 aa8.12□□□□□ -1.11
TARDBP-227ENST00000622057 ZNF443Q9Y2A4 671 aaPredicted RBP8.12□□□□□ -1.11
TARDBP-227ENST00000622057 SVEP1Q4LDE5 3571 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 COL6A5A8TX70 2615 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 FBN3Q75N90 2809 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 LOC390937A0A1W2PQ73 354 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 SH3PXD2BA1X283 911 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 TMEM247A6NEH6 219 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 TRPC5OSA6NMA1 111 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 VSTM5A8MXK1 200 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 VWC2LB2RUY7 222 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 B9A039 149 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 NDUFS8O00217 210 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 HDAC3O15379 428 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 FRS3O43559 492 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 SLC22A3O75751 556 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 AHSA1O95433 338 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 TGFAP01135 160 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 IL6P05231 212 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 OR4A8P0C604 315 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 APEHP13798 732 aaKnown RBP8.11□□□□□ -1.11
TARDBP-227ENST00000622057 SRD5A1P18405 259 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 IGFBP5P24593 272 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 GTF2E2P29084 291 aaKnown RBP8.11□□□□□ -1.11
TARDBP-227ENST00000622057 RPS5P46782 204 aaKnown RBP8.11□□□□□ -1.11
TARDBP-227ENST00000622057 CLDN17P56750 224 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 DSTNP60981 165 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 HOXC5Q00444 222 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 ROR2Q01974 943 aaKnown RBP8.11□□□□□ -1.11
TARDBP-227ENST00000622057 NAAAQ02083 359 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 LARS2Q15031 903 aaKnown RBP8.11□□□□□ -1.11
TARDBP-227ENST00000622057 KRTAP24-1Q3LI83 254 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 GTDC1Q4AE62 458 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 ZNF311Q5JNZ3 666 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 C1QTNF12Q5T7M4 302 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 LCE2DQ5TA82 110 aaPredicted RBP8.11□□□□□ -1.11
TARDBP-227ENST00000622057 LINGO2Q7L985 606 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 SERPINA11Q86U17 422 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 EPHX4Q8IUS5 362 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 MREGQ8N565 214 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 GLB1L3Q8NCI6 653 aaPredicted RBP8.11□□□□□ -1.11
TARDBP-227ENST00000622057 MGARPQ8TDB4 240 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 SLC38A5Q8WUX1 472 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 BCL2L2Q92843 193 aaPredicted RBP8.11□□□□□ -1.11
TARDBP-227ENST00000622057 MSI2Q96DH6 328 aaKnown RBP8.11□□□□□ -1.11
TARDBP-227ENST00000622057 TMEM19Q96HH6 336 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 KATNB1Q9BVA0 655 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 PRR14Q9BWN1 585 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 PARD6BQ9BYG5 372 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 ARMC7Q9H6L4 198 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 TPT1P8Q9HAU6 139 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 THAP1Q9NVV9 213 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 RASD1Q9Y272 281 aa8.11□□□□□ -1.11
TARDBP-227ENST00000622057 IGHV4-61A0A0C4DH41 118 aa8.1□□□□□ -1.11
TARDBP-227ENST00000622057 A0A0G2JPF8 293 aa8.1□□□□□ -1.11
TARDBP-227ENST00000622057 OR6C65A6NJZ3 312 aa8.1□□□□□ -1.11
TARDBP-227ENST00000622057 HNRNPCL2B2RXH8 293 aa8.1□□□□□ -1.11
TARDBP-227ENST00000622057 HNRNPCL3B7ZW38 293 aa8.1□□□□□ -1.11
TARDBP-227ENST00000622057 HNRNPCL1O60812 293 aaKnown RBP8.1□□□□□ -1.11
TARDBP-227ENST00000622057 CECR9P0C854 216 aa8.1□□□□□ -1.11
TARDBP-227ENST00000622057 HNRNPCL4P0DMR1 293 aa8.1□□□□□ -1.11
TARDBP-227ENST00000622057 PNMTP11086 282 aa8.1□□□□□ -1.11
TARDBP-227ENST00000622057 ZNF43P17038 809 aa8.1□□□□□ -1.11
TARDBP-227ENST00000622057 CBLP22681 906 aa8.1□□□□□ -1.11
TARDBP-227ENST00000622057 PAX7P23759 505 aa8.1□□□□□ -1.11
TARDBP-227ENST00000622057 CALCRP30988 508 aa8.1□□□□□ -1.11
TARDBP-227ENST00000622057 CAPZA2P47755 286 aa8.1□□□□□ -1.11
TARDBP-227ENST00000622057 MVDP53602 400 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms