RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 COL28A1Q2UY09 1125 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 GGTA1PQ4G0N0 100 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 TMEM196Q5HYL7 178 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 PAGE3Q5JUK9 113 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 CNTN4Q8IWV2 1026 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 PHB2Q99623 299 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 GYPBP06028 91 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 PTH2RP49190 550 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 MTCP1P56278 107 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 MPEG1Q2M385 716 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 MTFR2Q6P444 385 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 FAM83HQ6ZRV2 1179 aaPredicted RBP9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 MARCH3Q86UD3 253 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 TMEM174Q8WUU8 243 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 DEDD2Q8WXF8 326 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 TSPAN10Q9H1Z9 355 aaPredicted RBP9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 TP63Q9H3D4 680 aaPredicted RBP9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 SYNPO2LQ9H987 977 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 NPFFR2Q9Y5X5 522 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 MCRIP1C9JLW8 97 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 DPM1O60762 260 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 CRHBPP24387 322 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 ADH6P28332 368 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 PSMB10P40306 273 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 PPP2CBP62714 309 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 PPP2CAP67775 309 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 HENMT1Q5T8I9 393 aaKnown RBP9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 ABHD17CQ6PCB6 329 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 Q6ZNX1 250 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 CFAP77Q6ZQR2 320 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 WDSUB1Q8N9V3 476 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 ATOH8Q96SQ7 321 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 CENPOQ9BU64 300 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 NRSN2Q9GZP1 204 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 MKRN2Q9H000 416 aaKnown RBP9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 ABCG5Q9H222 651 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 QPCTLQ9NXS2 382 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 MBTPS2O43462 519 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 TK1P04183 234 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 SNCAP37840 140 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 GNB2P62879 340 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 HBA1P69905 142 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 CATR1Q13166 79 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 TMEM207Q6UWW9 146 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 MEX3DQ86XN8 651 aaKnown RBP9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 BEST3Q8N1M1 668 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 PATE1Q8WXA2 126 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 EGLN2Q96KS0 407 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 MRI1Q9BV20 369 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 SAP130Q9H0E3 1048 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 CXCL16Q9H2A7 254 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 LYRM4Q9HD34 91 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 LY75O60449 1722 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 NAV1Q8NEY1 1877 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 RGPD3A6NKT7 1758 aaPredicted RBP9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 RGPD4Q7Z3J3 1758 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 MYH1P12882 1939 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 A8MVM7 634 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 PLRG1O43660 514 aaKnown RBP9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 IFNA17P01571 189 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 CA5AP35218 305 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 WNT4P56705 351 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 MEX3BQ6ZN04 569 aaKnown RBP9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 ZNF534Q76KX8 674 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 CPEB2Q7Z5Q1 589 aaKnown RBP9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 RNF113BQ8IZP6 322 aaKnown RBP9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 TMEM102Q8N9M5 508 aaPredicted RBP9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 RNF128Q8TEB7 428 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 HIF1ANQ9NWT6 349 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 UBR3Q6ZT12 1888 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 CCDC88AQ3V6T2 1871 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 N4BP2Q86UW6 1770 aaPredicted RBP9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 CEBPZOSA8MTT3 80 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 SSX5O60225 188 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 CRYZL1O95825 349 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 S100PP25815 95 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 FGL1Q08830 312 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 KCNJ8Q15842 424 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 ASTLQ6HA08 431 aaPredicted RBP9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 GDPGP1Q6ZNW5 385 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 NOXA1Q86UR1 476 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 LILRA2Q8N149 483 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 LKAAEAR1Q8TD35 194 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 PPIL3Q9H2H8 161 aaKnown RBP9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 EGLN3Q9H6Z9 239 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 GCM1Q9NP62 436 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 LANCL2Q9NS86 450 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 OLAHQ9NV23 265 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 MRPL15Q9P015 296 aaKnown RBP9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 VAPAQ9P0L0 249 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 FBXO4Q9UKT5 387 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 YARS2Q9Y2Z4 477 aaKnown RBP9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 FAM96BQ9Y3D0 163 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 MYH13Q9UKX3 1938 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 IGLV3-10A0A075B6K4 115 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 RNF212BA8MTL3 300 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 ZNF732B4DXR9 585 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 CREBL2O60519 120 aaPredicted RBP9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 PRAMEF4O60810 478 aa9.06□□□□□ -0.96
CLTCL1-211ENST00000621271 LILRB5O75023 590 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms