RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 SELENOPP49908 381 aa15.05■□□□□ -0
HMGN3-203ENST00000620514 IRX1P78414 480 aaPredicted RBP15.05■□□□□ -0
HMGN3-203ENST00000620514 TNK1Q13470 666 aa15.05■□□□□ -0
HMGN3-203ENST00000620514 SELPLGQ14242 412 aa15.05■□□□□ -0
HMGN3-203ENST00000620514 KRTAP21-3Q3LHN1 58 aa15.05■□□□□ -0
HMGN3-203ENST00000620514 ELOA3BQ3SY89 546 aa15.05■□□□□ -0
HMGN3-203ENST00000620514 C6orf89Q6UWU4 347 aa15.05■□□□□ -0
HMGN3-203ENST00000620514 TMEM108Q6UXF1 575 aa15.05■□□□□ -0
HMGN3-203ENST00000620514 B3GLCTQ6Y288 498 aa15.05■□□□□ -0
HMGN3-203ENST00000620514 CREB3L2Q70SY1 520 aa15.05■□□□□ -0
HMGN3-203ENST00000620514 RETREG3Q86VR2 466 aa15.05■□□□□ -0
HMGN3-203ENST00000620514 KRT73Q86Y46 540 aa15.05■□□□□ -0
HMGN3-203ENST00000620514 ELOA3Q8NG57 546 aa15.05■□□□□ -0
HMGN3-203ENST00000620514 MFSD8Q8NHS3 518 aa15.05■□□□□ -0
HMGN3-203ENST00000620514 STON2Q8WXE9 905 aa15.05■□□□□ -0
HMGN3-203ENST00000620514 TRMT61AQ96FX7 289 aaKnown RBP15.05■□□□□ -0
HMGN3-203ENST00000620514 WFDC6Q9BQY6 131 aa15.05■□□□□ -0
HMGN3-203ENST00000620514 RABEP2Q9H5N1 569 aa15.05■□□□□ -0
HMGN3-203ENST00000620514 PIF1Q9H611 641 aa15.05■□□□□ -0
HMGN3-203ENST00000620514 TMEM38AQ9H6F2 299 aa15.05■□□□□ -0
HMGN3-203ENST00000620514 LEF1Q9UJU2 399 aaPredicted RBP15.05■□□□□ -0
HMGN3-203ENST00000620514 IGKV1D-42A0A075B6H8 117 aa15.04■□□□□ -0
HMGN3-203ENST00000620514 E7EQL1 145 aa15.04■□□□□ -0
HMGN3-203ENST00000620514 NDUFS7O75251 213 aa15.04■□□□□ -0
HMGN3-203ENST00000620514 VAMP5O95183 116 aa15.04■□□□□ -0
HMGN3-203ENST00000620514 IGHV4-39P01824 125 aa15.04■□□□□ -0
HMGN3-203ENST00000620514 SLC6A2P23975 617 aa15.04■□□□□ -0
HMGN3-203ENST00000620514 PTAFRP25105 342 aa15.04■□□□□ -0
HMGN3-203ENST00000620514 HIKESHIQ53FT3 197 aa15.04■□□□□ -0
HMGN3-203ENST00000620514 NIPAL3Q6P499 406 aa15.04■□□□□ -0
HMGN3-203ENST00000620514 SLC22A25Q6T423 547 aa15.04■□□□□ -0
HMGN3-203ENST00000620514 KLHL17Q6TDP4 642 aa15.04■□□□□ -0
HMGN3-203ENST00000620514 DHDDSQ86SQ9 333 aa15.04■□□□□ -0
HMGN3-203ENST00000620514 DTX2Q86UW9 622 aa15.04■□□□□ -0
HMGN3-203ENST00000620514 PTOV1Q86YD1 416 aa15.04■□□□□ -0
HMGN3-203ENST00000620514 LSMEM1Q8N8F7 131 aa15.04■□□□□ -0
HMGN3-203ENST00000620514 POMGNT2Q8NAT1 580 aa15.04■□□□□ -0
HMGN3-203ENST00000620514 C1orf162Q8NEQ5 155 aaPredicted RBP15.04■□□□□ -0
HMGN3-203ENST00000620514 SPATA5L1Q9BVQ7 753 aa15.04■□□□□ -0
HMGN3-203ENST00000620514 CORO2BQ9UQ03 480 aa15.04■□□□□ -0
HMGN3-203ENST00000620514 RASD1Q9Y272 281 aa15.04■□□□□ -0
HMGN3-203ENST00000620514 NAV3Q8IVL0 2385 aa15.04■□□□□ -0
HMGN3-203ENST00000620514 FAM171A2A8MVW0 826 aa15.03■□□□□ -0
HMGN3-203ENST00000620514 TPST2O60704 377 aa15.03■□□□□ -0
HMGN3-203ENST00000620514 LGI1O95970 557 aa15.03■□□□□ -0
HMGN3-203ENST00000620514 MTPNP58546 118 aa15.03■□□□□ -0
HMGN3-203ENST00000620514 TGFBR3Q03167 851 aa15.03■□□□□ -0
HMGN3-203ENST00000620514 DMTNQ08495 405 aa15.03■□□□□ -0
HMGN3-203ENST00000620514 CLEC12BQ2HXU8 276 aa15.03■□□□□ -0
HMGN3-203ENST00000620514 LINGO2Q7L985 606 aa15.03■□□□□ -0
HMGN3-203ENST00000620514 C17orf78Q8N4C9 275 aa15.03■□□□□ -0
HMGN3-203ENST00000620514 HIPK4Q8NE63 616 aa15.03■□□□□ -0
HMGN3-203ENST00000620514 TAAR8Q969N4 342 aa15.03■□□□□ -0
HMGN3-203ENST00000620514 RADILQ96JH8 1075 aa15.03■□□□□ -0
HMGN3-203ENST00000620514 ANKRD27Q96NW4 1050 aa15.03■□□□□ -0
HMGN3-203ENST00000620514 ALKBH3Q96Q83 286 aaPredicted RBP15.03■□□□□ -0
HMGN3-203ENST00000620514 ZNF607Q96SK3 696 aa15.03■□□□□ -0
HMGN3-203ENST00000620514 ALG2Q9H553 416 aa15.03■□□□□ -0
HMGN3-203ENST00000620514 C12orf10Q9HB07 376 aa15.03■□□□□ -0
HMGN3-203ENST00000620514 GDF2Q9UK05 429 aaPredicted RBP15.03■□□□□ -0
HMGN3-203ENST00000620514 POU2F3Q9UKI9 436 aa15.03■□□□□ -0
HMGN3-203ENST00000620514 MGAT4BQ9UQ53 548 aa15.03■□□□□ -0
HMGN3-203ENST00000620514 AMDHD2Q9Y303 409 aa15.03■□□□□ -0
HMGN3-203ENST00000620514 NDUFAF1Q9Y375 327 aa15.03■□□□□ -0
HMGN3-203ENST00000620514 FN1P02751 2386 aaKnown RBP15.03■□□□□ -0
HMGN3-203ENST00000620514 A0A0G2JND7 137 aa15.02■□□□□ -0
HMGN3-203ENST00000620514 M0R082 166 aa15.02■□□□□ -0
HMGN3-203ENST00000620514 UPK3AO75631 287 aa15.02■□□□□ -0
HMGN3-203ENST00000620514 KRT33AO76009 404 aa15.02■□□□□ -0
HMGN3-203ENST00000620514 MFN2O95140 757 aa15.02■□□□□ -0
HMGN3-203ENST00000620514 CBLP22681 906 aa15.02■□□□□ -0
HMGN3-203ENST00000620514 GTF2E2P29084 291 aaKnown RBP15.02■□□□□ -0
HMGN3-203ENST00000620514 ACVR1BP36896 505 aa15.02■□□□□ -0
HMGN3-203ENST00000620514 CLDN17P56750 224 aa15.02■□□□□ -0
HMGN3-203ENST00000620514 RGS8P57771 180 aaPredicted RBP15.02■□□□□ -0
HMGN3-203ENST00000620514 VEZF1Q14119 521 aa15.02■□□□□ -0
HMGN3-203ENST00000620514 ALG10BQ5I7T1 473 aa15.02■□□□□ -0
HMGN3-203ENST00000620514 ARMC8Q8IUR7 673 aa15.02■□□□□ -0
HMGN3-203ENST00000620514 DPP10Q8N608 796 aa15.02■□□□□ -0
HMGN3-203ENST00000620514 SMYD1Q8NB12 490 aa15.02■□□□□ -0
HMGN3-203ENST00000620514 MAPK1IP1LQ8NDC0 245 aa15.02■□□□□ -0
HMGN3-203ENST00000620514 ZNF417Q8TAU3 575 aa15.02■□□□□ -0
HMGN3-203ENST00000620514 RNF217Q8TC41 542 aa15.02■□□□□ -0
HMGN3-203ENST00000620514 ZNF587Q96SQ5 575 aaPredicted RBP15.02■□□□□ -0
HMGN3-203ENST00000620514 CGREF1Q99674 301 aa15.02■□□□□ -0
HMGN3-203ENST00000620514 B3GAT1Q9P2W7 334 aa15.02■□□□□ -0
HMGN3-203ENST00000620514 ANGPT4Q9Y264 503 aa15.02■□□□□ -0
HMGN3-203ENST00000620514 NSD1Q96L73 2696 aaPredicted RBP15.02□□□□□ -0.01
HMGN3-203ENST00000620514 CSPG4Q6UVK1 2322 aa15.01□□□□□ -0.01
HMGN3-203ENST00000620514 PLCE1Q9P212 2302 aa15.01□□□□□ -0.01
HMGN3-203ENST00000620514 PRORSD1PA6NEY8 169 aa15.01□□□□□ -0.01
HMGN3-203ENST00000620514 M0R3H8 397 aa15.01□□□□□ -0.01
HMGN3-203ENST00000620514 ANGPT2O15123 496 aa15.01□□□□□ -0.01
HMGN3-203ENST00000620514 FZD7O75084 574 aa15.01□□□□□ -0.01
HMGN3-203ENST00000620514 OPN1SWP03999 348 aa15.01□□□□□ -0.01
HMGN3-203ENST00000620514 GRPRP30550 384 aa15.01□□□□□ -0.01
HMGN3-203ENST00000620514 TTKP33981 857 aa15.01□□□□□ -0.01
HMGN3-203ENST00000620514 PCBP3P57721 371 aaKnown RBP15.01□□□□□ -0.01
HMGN3-203ENST00000620514 PRPS1P60891 318 aa15.01□□□□□ -0.01
HMGN3-203ENST00000620514 NCALDP61601 193 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms