RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 VGLL1Q99990 258 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 OR52A4PA6NMU1 304 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 NCBP2LA6PVI3 153 aaKnown RBP3.09□□□□□ -1.92
LPP-220ENST00000617246 A8MV72 311 aaPredicted RBP3.09□□□□□ -1.92
LPP-220ENST00000617246 GAPDHSO14556 408 aaPredicted RBP3.09□□□□□ -1.92
LPP-220ENST00000617246 PRSS23O95084 383 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 GATA3P23771 443 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 CXCR5P32302 372 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 CTSKP43235 329 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 NPY4RP50391 375 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 SUMO3P55854 103 aaPredicted RBP3.09□□□□□ -1.92
LPP-220ENST00000617246 TBCEQ15813 527 aaPredicted RBP3.09□□□□□ -1.92
LPP-220ENST00000617246 ACSBG2Q5FVE4 666 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 JAGN1Q8N5M9 183 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 CSNK2A3Q8NEV1 391 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 PDXPQ96GD0 296 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 SPIN2AQ99865 258 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 SPIN2BQ9BPZ2 258 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 DESI2Q9BSY9 194 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 JAM3Q9BX67 310 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 CA10Q9NS85 328 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 NRG2O14511 850 aaPredicted RBP3.09□□□□□ -1.92
LPP-220ENST00000617246 HLA-DQB2P05538 268 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 CDK9P50750 372 aaKnown RBP3.09□□□□□ -1.92
LPP-220ENST00000617246 PPP2CBP62714 309 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 PPP2CAP67775 309 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 LRRTM3Q86VH5 581 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 PYROXD2Q8N2H3 581 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 TSEN2Q8NCE0 465 aaKnown RBP3.09□□□□□ -1.92
LPP-220ENST00000617246 OR4K15Q8NH41 348 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 EMG1Q92979 244 aaKnown RBP3.09□□□□□ -1.92
LPP-220ENST00000617246 PDCD1LG2Q9BQ51 273 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 HINT2Q9BX68 163 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 PDE10AQ9Y233 779 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 CHD3Q12873 2000 aaKnown RBP3.09□□□□□ -1.92
LPP-220ENST00000617246 hCG_1818297A0A087WSY0 165 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 EML1O00423 815 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 ADRB2P07550 413 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 VMA21Q3ZAQ7 101 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 OR6F1Q8NGZ6 308 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 GUCD1Q96NT3 240 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 CRLF2Q9HC73 371 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 TMEM229AB2RXF0 380 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 JUNP05412 331 aaKnown RBP3.09□□□□□ -1.92
LPP-220ENST00000617246 CRHP06850 196 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 HOXC4P09017 264 aaPredicted RBP3.09□□□□□ -1.92
LPP-220ENST00000617246 CSN1S1P47710 185 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 ROR2Q01974 943 aaKnown RBP3.09□□□□□ -1.92
LPP-220ENST00000617246 ADGRF3Q8IZF5 1079 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 OR1J1Q8NGS3 322 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 PIWIL2Q8TC59 973 aaKnown RBP3.09□□□□□ -1.92
LPP-220ENST00000617246 SIGLEC12Q96PQ1 595 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 ALG8Q9BVK2 526 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 TBC1D24Q9ULP9 559 aa3.09□□□□□ -1.92
LPP-220ENST00000617246 NAT1P18440 290 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 PTAFRP25105 342 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 CASP7P55210 303 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 GMFBP60983 142 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 UGT3A2Q3SY77 523 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 ANKDD1AQ495B1 522 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 CXorf66Q5JRM2 361 aaPredicted RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 NCR3LG1Q68D85 454 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 C6orf89Q6UWU4 347 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 ZNF517Q6ZMY9 492 aaPredicted RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 CREB3L2Q70SY1 520 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 TMPRSS7Q7RTY8 843 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 SPACA3Q8IXA5 215 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 Q8IYB0 196 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 HSD17B11Q8NBQ5 300 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 OR5M9Q8NGP3 310 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 FAM222BQ8WU58 562 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 CHAC2Q8WUX2 184 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 ARSGQ96EG1 525 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 MED30Q96HR3 178 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 NT5DC2Q9H857 520 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 NCR1O76036 304 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 GK3PQ14409 553 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 INPP5JQ15735 1006 aaPredicted RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 MZT2BQ6NZ67 158 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 SLC16A9Q7RTY1 509 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 D2HGDHQ8N465 521 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 TMEM138Q9NPI0 162 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 MBD2Q9UBB5 411 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 PLEKHB1Q9UF11 243 aaPredicted RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 PI4KAP42356 2102 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 DXOO77932 396 aaKnown RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 UGT2B10P36537 528 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 Q6ZVL8 140 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 RNF130Q86XS8 419 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 GATSQ8NAP1 163 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 RFT1Q96AA3 541 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 METTL2AQ96IZ6 378 aaKnown RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 LMF1Q96S06 567 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 RLIMQ9NVW2 624 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 CLCA1A8K7I4 914 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 ORM2P19652 201 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 POU3F1Q03052 451 aaPredicted RBP3.08□□□□□ -1.92
LPP-220ENST00000617246 ESPNLQ6ZVH7 1005 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 TSSK3Q96PN8 268 aa3.08□□□□□ -1.92
LPP-220ENST00000617246 CMSS1Q9BQ75 279 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms