RNA–Protein interactions for RNA: ENST00000617087.1

PVT1-225, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 130 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-225	ENST00000617087	CTAG2	O75638	210 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	C1orf105	O95561	183 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	IGHV3-48	P01763	117 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	PRKAR2B	P31323	418 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	SHMT2	P34897	504 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	BTD	P43251	543 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	YAP1	P46937	504 aa	Known RBP	4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	KCNJ2	P63252	427 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	SPANXN2	Q5MJ10	180 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	C1orf185	Q5T7R7	199 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	LRRC74B	Q6ZQY2	392 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	BZW1	Q7L1Q6	419 aa	Known RBP	4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	VRK2	Q86Y07	508 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	CDC20B	Q86Y33	519 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	ERI1	Q8IV48	349 aa	Known RBP	4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	OR7G2	Q8NG99	324 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	OR4C5	Q8NGB2	326 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	MRAP	Q8TCY5	172 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	NEIL2	Q969S2	332 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	CMTM7	Q96FZ5	175 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	ILKAP	Q9H0C8	392 aa	Predicted RBP	4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	ANKRA2	Q9H9E1	313 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	ISG20L2	Q9H9L3	353 aa	Known RBP	4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	DDX18	Q9NVP1	670 aa	Known RBP	4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	ZNF107	Q9UII5	783 aa	Predicted RBP	4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	KIF25	Q9UIL4	384 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	MOK	Q9UQ07	419 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	N6AMT1	Q9Y5N5	214 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	WDR19	Q8NEZ3	1342 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	PDS5B	Q9NTI5	1447 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	CFTR	P13569	1480 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	PHF3	Q92576	2039 aa	Known RBP	4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	LRRIQ4	A6NIV6	560 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087		C9JVG2	144 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	DFNA5	O60443	496 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	GAS8-AS1	O95177	125 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	SERPIND1	P05546	499 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087		P0C879	139 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	UBTFL1	P0CB47	393 aa	Predicted RBP	4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	ANXA8	P13928	327 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	ZNF43	P17038	809 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	FDFT1	P37268	417 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	SYK	P43405	635 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	KIR2DS4	P43632	304 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	GSS	P48637	474 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	P2RY4	P51582	365 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	TLE4	Q04727	773 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	ARHGAP19	Q14CB8	494 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	KIAA0040	Q15053	153 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	ANXA8L1	Q5VT79	327 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	TFAP2E	Q6VUC0	442 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	BIVM	Q86UB2	503 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	ZNF589	Q86UQ0	364 aa	Predicted RBP	4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	RDH10	Q8IZV5	341 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	C6orf223	Q8N319	242 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	CCDC148	Q8NFR7	591 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	OR9A1P	Q8NGU1	263 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	AGR3	Q8TD06	166 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	MCUR1	Q96AQ8	359 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	HIST1H4G	Q99525	98 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	RIOK1	Q9BRS2	568 aa	Known RBP	4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	MTG1	Q9BT17	334 aa	Predicted RBP	4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	MFF	Q9GZY8	342 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	TMEM185B	Q9H7F4	350 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	VNN3	Q9NY84	501 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	UGT2A1	Q9Y4X1	527 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087		V9GY05	133 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	WDR62	O43379	1518 aa		4.09	□□□□□ -1.75
PVT1-225	ENST00000617087	CHD4	Q14839	1912 aa		4.09	□□□□□ -1.76
PVT1-225	ENST00000617087	PSTPIP1	O43586	416 aa		4.08	□□□□□ -1.76
PVT1-225	ENST00000617087	CDH16	O75309	829 aa		4.08	□□□□□ -1.76
PVT1-225	ENST00000617087	FTH1	P02794	183 aa		4.08	□□□□□ -1.76
PVT1-225	ENST00000617087	TBP	P20226	339 aa		4.08	□□□□□ -1.76
PVT1-225	ENST00000617087	GPM6A	P51674	278 aa		4.08	□□□□□ -1.76
PVT1-225	ENST00000617087	RIPPLY3	P57055	190 aa		4.08	□□□□□ -1.76
PVT1-225	ENST00000617087	RPS15	P62841	145 aa	Known RBP	4.08	□□□□□ -1.76
PVT1-225	ENST00000617087	C19orf35	Q6ZS72	473 aa		4.08	□□□□□ -1.76
PVT1-225	ENST00000617087	PRSS41	Q7RTY9	318 aa		4.08	□□□□□ -1.76
PVT1-225	ENST00000617087	PIANP	Q8IYJ0	282 aa		4.08	□□□□□ -1.76
PVT1-225	ENST00000617087	CCDC71L	Q8N9Z2	235 aa		4.08	□□□□□ -1.76
PVT1-225	ENST00000617087	PLPPR1	Q8TBJ4	325 aa		4.08	□□□□□ -1.76
PVT1-225	ENST00000617087	BRSK1	Q8TDC3	778 aa		4.08	□□□□□ -1.76
PVT1-225	ENST00000617087	PYROXD1	Q8WU10	500 aa		4.08	□□□□□ -1.76
PVT1-225	ENST00000617087	OR1E3	Q8WZA6	343 aa		4.08	□□□□□ -1.76
PVT1-225	ENST00000617087	PANX1	Q96RD7	426 aa		4.08	□□□□□ -1.76
PVT1-225	ENST00000617087	TGS1	Q96RS0	853 aa	Known RBP	4.08	□□□□□ -1.76
PVT1-225	ENST00000617087	C20orf85	Q9H1P6	137 aa		4.08	□□□□□ -1.76
PVT1-225	ENST00000617087	INPP5E	Q9NRR6	644 aa		4.08	□□□□□ -1.76
PVT1-225	ENST00000617087	ZNF275	Q9NSD4	429 aa	Predicted RBP	4.08	□□□□□ -1.76
PVT1-225	ENST00000617087	GIN1	Q9NXP7	522 aa		4.08	□□□□□ -1.76
PVT1-225	ENST00000617087	MRC2	Q9UBG0	1479 aa		4.08	□□□□□ -1.76
PVT1-225	ENST00000617087	ABCD2	Q9UBJ2	740 aa		4.08	□□□□□ -1.76
PVT1-225	ENST00000617087	KIAA1257	Q9ULG3	409 aa		4.08	□□□□□ -1.76
PVT1-225	ENST00000617087	FANCD2	Q9BXW9	1451 aa		4.07	□□□□□ -1.76
PVT1-225	ENST00000617087	NINL	Q9Y2I6	1382 aa		4.07	□□□□□ -1.76
PVT1-225	ENST00000617087	TTC41P	Q6P2S7	1318 aa		4.07	□□□□□ -1.76
PVT1-225	ENST00000617087	NSG1	A0A0A6YYJ2	146 aa		4.07	□□□□□ -1.76
PVT1-225	ENST00000617087	TRBV11-1	A0A0K0K1C0	115 aa		4.07	□□□□□ -1.76
PVT1-225	ENST00000617087	FAM168B	A1KXE4	195 aa		4.07	□□□□□ -1.76
PVT1-225	ENST00000617087		H0YIV9	168 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms