RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 LRIF1Q5T3J3 769 aa10.67□□□□□ -0.7
PDLIM2-218ENST00000614502 PRAMEF8Q5VWM4 474 aa10.67□□□□□ -0.7
PDLIM2-218ENST00000614502 PRAMEF7Q5VXH5 474 aa10.67□□□□□ -0.7
PDLIM2-218ENST00000614502 AAED1Q7RTV5 226 aa10.67□□□□□ -0.7
PDLIM2-218ENST00000614502 ATG4DQ86TL0 474 aaPredicted RBP10.67□□□□□ -0.7
PDLIM2-218ENST00000614502 MUC15Q8N387 334 aa10.67□□□□□ -0.7
PDLIM2-218ENST00000614502 STK35Q8TDR2 534 aa10.67□□□□□ -0.7
PDLIM2-218ENST00000614502 TSPEARQ8WU66 669 aa10.67□□□□□ -0.7
PDLIM2-218ENST00000614502 SLC35B4Q969S0 331 aa10.67□□□□□ -0.7
PDLIM2-218ENST00000614502 DNAJA3Q96EY1 480 aa10.67□□□□□ -0.7
PDLIM2-218ENST00000614502 SPATA9Q9BWV2 254 aa10.67□□□□□ -0.7
PDLIM2-218ENST00000614502 SLC17A5Q9NRA2 495 aa10.67□□□□□ -0.7
PDLIM2-218ENST00000614502 KLHL14Q9P2G3 628 aa10.67□□□□□ -0.7
PDLIM2-218ENST00000614502 ZNF443Q9Y2A4 671 aaPredicted RBP10.67□□□□□ -0.7
PDLIM2-218ENST00000614502 B3GALT5Q9Y2C3 310 aa10.67□□□□□ -0.7
PDLIM2-218ENST00000614502 PCDHB14Q9Y5E9 798 aa10.67□□□□□ -0.7
PDLIM2-218ENST00000614502 PMF1-BGLAPU3KQ54 211 aa10.67□□□□□ -0.7
PDLIM2-218ENST00000614502 LIPT2A6NK58 231 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 AQP7P3A6NL99 342 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 E7EQL1 145 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 CD5LO43866 347 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 CSF3P09919 207 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 GTF2E2P29084 291 aaKnown RBP10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 NTF4P34130 210 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 SF3A3Q12874 501 aaKnown RBP eCLIP10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 FADDQ13158 208 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 OR7A5Q15622 319 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 TSPO2Q5TGU0 170 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 CLEC2AQ6UVW9 174 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 C5orf46Q6UWT4 87 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 ZNF836Q6ZNA1 936 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 DNM1P46Q6ZS02 220 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 VRK2Q86Y07 508 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 MSRB3Q8IXL7 192 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 CADM2Q8N3J6 435 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 OR9K2Q8NGE7 335 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 OR52E4Q8NGH9 312 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 SPATA3Q8NHX4 192 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 SLC38A5Q8WUX1 472 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 C10orf82Q8WW14 230 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 AURKBQ96GD4 344 aaPredicted RBP10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 BOD1Q96IK1 185 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 KCNS3Q9BQ31 491 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 CACNG6Q9BXT2 260 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 SLC7A10Q9NS82 523 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 MRGBPQ9NV56 204 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 SLC25A37Q9NYZ2 338 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 SLAMF8Q9P0V8 285 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 RASD1Q9Y272 281 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 GMEB1Q9Y692 573 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 ATP23Q9Y6H3 246 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 YLPM1P49750 1951 aaKnown RBP10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 PLCE1Q9P212 2302 aa10.66□□□□□ -0.7
PDLIM2-218ENST00000614502 TRBV5-3A0A0A0MS03 114 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 ZC3H12DA2A288 527 aaKnown RBP10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 ZNF587BE7ETH6 402 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 H7C417 338 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 CLIC1O00299 241 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 SSX4O60224 188 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 AKR7A3O95154 331 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 AHSA1O95433 338 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 IFNA2P01563 188 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 TFPTP0C1Z6 253 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 GKN3PP0CG01 181 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 ETFAP13804 333 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 SLC25A16P16260 332 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 PPIBP23284 216 aaKnown RBP10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 APOBEC3AP31941 199 aaPredicted RBP10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 ACAA2P42765 397 aaKnown RBP10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 RGNQ15493 299 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 MAPK11Q15759 364 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 C11orf71Q6IPW1 123 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 DLEU7Q6UYE1 221 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 GPAT4Q86UL3 456 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 DPP10Q8N608 796 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 TMEM99Q8N816 258 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 WDR31Q8NA23 367 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 BBS10Q8TAM1 723 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 TMEM19Q96HH6 336 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 BCL2L10Q9HD36 194 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 SAR1AQ9NR31 198 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 RLIMQ9NVW2 624 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 RPS6KB2Q9UBS0 482 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 LEF1Q9UJU2 399 aaPredicted RBP10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 GDF2Q9UK05 429 aaPredicted RBP10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 FBXO9Q9UK97 447 aaPredicted RBP10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 NDUFAF1Q9Y375 327 aa10.65□□□□□ -0.7
PDLIM2-218ENST00000614502 A0A1W2PR80 420 aa10.64□□□□□ -0.71
PDLIM2-218ENST00000614502 C5orf58C9J3I9 102 aa10.64□□□□□ -0.71
PDLIM2-218ENST00000614502 FRS3O43559 492 aa10.64□□□□□ -0.71
PDLIM2-218ENST00000614502 OR2T1O43869 369 aa10.64□□□□□ -0.71
PDLIM2-218ENST00000614502 BMP2P12643 396 aa10.64□□□□□ -0.71
PDLIM2-218ENST00000614502 HOXB1P14653 301 aaPredicted RBP10.64□□□□□ -0.71
PDLIM2-218ENST00000614502 LSP1P33241 339 aa10.64□□□□□ -0.71
PDLIM2-218ENST00000614502 SEC24CP53992 1094 aa10.64□□□□□ -0.71
PDLIM2-218ENST00000614502 GYS2P54840 703 aa10.64□□□□□ -0.71
PDLIM2-218ENST00000614502 SH3BGRP55822 239 aaPredicted RBP10.64□□□□□ -0.71
PDLIM2-218ENST00000614502 UBE2NP61088 152 aaKnown RBP10.64□□□□□ -0.71
PDLIM2-218ENST00000614502 KLF10Q13118 480 aa10.64□□□□□ -0.71
PDLIM2-218ENST00000614502 ZNF311Q5JNZ3 666 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms