RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 LMF1Q96S06 567 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 GFI1Q99684 422 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 SLC27A6Q9Y2P4 619 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 SHOXO15266 292 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 IFNGP01579 166 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 ATP1B1P05026 303 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 GJA4P35212 333 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 CFAP77Q6ZQR2 320 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 OR2L13Q8N349 312 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 ANKRD19PQ9H560 264 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 NCDNQ9UBB6 729 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 TDRD6O60522 2096 aaKnown RBP18.73■□□□□ 0.59
SSBP3-216ENST00000610401 C17orf51A8MQB3 221 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 LEG1Q6P5S2 330 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 SMIM4Q8WVI0 70 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 FCAMRQ8WWV6 532 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 SLC25A38Q96DW6 304 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 SPACA7Q96KW9 195 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 TRAF4Q9BUZ4 470 aaPredicted RBP18.73■□□□□ 0.59
SSBP3-216ENST00000610401 ZNF350Q9GZX5 532 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 CAMK2AQ9UQM7 478 aa18.73■□□□□ 0.59
SSBP3-216ENST00000610401 ATP6V1G2-DDX39BF2Z307 99 aa18.72■□□□□ 0.59
SSBP3-216ENST00000610401 MAT1AQ00266 395 aaKnown RBP18.72■□□□□ 0.59
SSBP3-216ENST00000610401 C3P1Q6ZMU1 363 aa18.72■□□□□ 0.59
SSBP3-216ENST00000610401 MAMSTRQ6ZN01 415 aa18.72■□□□□ 0.59
SSBP3-216ENST00000610401 FAM174AQ8TBP5 190 aa18.72■□□□□ 0.59
SSBP3-216ENST00000610401 MNTQ99583 582 aa18.72■□□□□ 0.59
SSBP3-216ENST00000610401 RPP25Q9BUL9 199 aaKnown RBP18.72■□□□□ 0.59
SSBP3-216ENST00000610401 NRIP3Q9NQ35 241 aa18.72■□□□□ 0.59
SSBP3-216ENST00000610401 PYCARD-AS1I3L0S3 204 aa18.72■□□□□ 0.59
SSBP3-216ENST00000610401 KRT33AO76009 404 aa18.72■□□□□ 0.59
SSBP3-216ENST00000610401 SLC6A6P31641 620 aa18.72■□□□□ 0.59
SSBP3-216ENST00000610401 MFSD13AQ14CX5 517 aa18.72■□□□□ 0.59
SSBP3-216ENST00000610401 TMED4Q7Z7H5 227 aa18.72■□□□□ 0.59
SSBP3-216ENST00000610401 STPG2Q8N412 459 aa18.72■□□□□ 0.59
SSBP3-216ENST00000610401 FAM3CQ92520 227 aa18.72■□□□□ 0.59
SSBP3-216ENST00000610401 PPP1R14AQ96A00 147 aa18.72■□□□□ 0.59
SSBP3-216ENST00000610401 TCF7L1Q9HCS4 588 aa18.72■□□□□ 0.59
SSBP3-216ENST00000610401 NTMQ9P121 344 aa18.72■□□□□ 0.59
SSBP3-216ENST00000610401 ITPKBP27987 946 aa18.71■□□□□ 0.59
SSBP3-216ENST00000610401 NUDT1P36639 197 aa18.71■□□□□ 0.59
SSBP3-216ENST00000610401 FAM74A1Q5RGS3 127 aa18.71■□□□□ 0.59
SSBP3-216ENST00000610401 LSMEM1Q8N8F7 131 aa18.71■□□□□ 0.59
SSBP3-216ENST00000610401 OR9A4Q8NGU2 314 aa18.71■□□□□ 0.59
SSBP3-216ENST00000610401 OR1E3Q8WZA6 343 aa18.71■□□□□ 0.59
SSBP3-216ENST00000610401 GAL3ST3Q96A11 431 aa18.71■□□□□ 0.59
SSBP3-216ENST00000610401 APOOQ9BUR5 198 aa18.71■□□□□ 0.59
SSBP3-216ENST00000610401 TTYH1Q9H313 450 aaPredicted RBP18.71■□□□□ 0.59
SSBP3-216ENST00000610401 FBXL2Q9UKC9 423 aa18.71■□□□□ 0.59
SSBP3-216ENST00000610401 NUP210Q8TEM1 1887 aaPredicted RBP18.71■□□□□ 0.59
SSBP3-216ENST00000610401 CXorf51AA0A1B0GTR3 108 aa18.71■□□□□ 0.59
SSBP3-216ENST00000610401 H0YGG7 62 aa18.71■□□□□ 0.59
SSBP3-216ENST00000610401 PLATP00750 562 aa18.71■□□□□ 0.59
SSBP3-216ENST00000610401 AQP2P41181 271 aa18.71■□□□□ 0.59
SSBP3-216ENST00000610401 ARF3P61204 181 aaPredicted RBP18.71■□□□□ 0.59
SSBP3-216ENST00000610401 PCGF3Q3KNV8 242 aa18.71■□□□□ 0.59
SSBP3-216ENST00000610401 SLC22A10Q63ZE4 541 aa18.71■□□□□ 0.59
SSBP3-216ENST00000610401 FAM199XQ6PEV8 388 aaPredicted RBP18.71■□□□□ 0.59
SSBP3-216ENST00000610401 SLITRK4Q8IW52 837 aa18.71■□□□□ 0.59
SSBP3-216ENST00000610401 SDHAF2Q9NX18 166 aa18.71■□□□□ 0.59
SSBP3-216ENST00000610401 ANKRD10Q9NXR5 420 aa18.71■□□□□ 0.59
SSBP3-216ENST00000610401 LRIT1Q9P2V4 623 aa18.71■□□□□ 0.59
SSBP3-216ENST00000610401 IFITM5A6NNB3 132 aa18.71■□□□□ 0.58
SSBP3-216ENST00000610401 IGKV1D-16P01601 117 aa18.71■□□□□ 0.58
SSBP3-216ENST00000610401 NAT1P18440 290 aa18.71■□□□□ 0.58
SSBP3-216ENST00000610401 TAS2R43P59537 309 aa18.71■□□□□ 0.58
SSBP3-216ENST00000610401 BDH1Q02338 343 aa18.71■□□□□ 0.58
SSBP3-216ENST00000610401 LRRC69Q6ZNQ3 347 aa18.71■□□□□ 0.58
SSBP3-216ENST00000610401 NARS2Q96I59 477 aaKnown RBP18.71■□□□□ 0.58
SSBP3-216ENST00000610401 LMAN2LQ9H0V9 348 aa18.71■□□□□ 0.58
SSBP3-216ENST00000610401 NPFFR2Q9Y5X5 522 aa18.71■□□□□ 0.58
SSBP3-216ENST00000610401 GOSR2O14653 212 aa18.7■□□□□ 0.58
SSBP3-216ENST00000610401 PRICKLE3O43900 615 aaPredicted RBP18.7■□□□□ 0.58
SSBP3-216ENST00000610401 ZNF35P13682 527 aa18.7■□□□□ 0.58
SSBP3-216ENST00000610401 PTH2RP49190 550 aa18.7■□□□□ 0.58
SSBP3-216ENST00000610401 FIGLAQ6QHK4 219 aa18.7■□□□□ 0.58
SSBP3-216ENST00000610401 THEM6Q8WUY1 208 aa18.7■□□□□ 0.58
SSBP3-216ENST00000610401 DIABLOQ9NR28 239 aa18.7■□□□□ 0.58
SSBP3-216ENST00000610401 KLHL9Q9P2J3 617 aa18.7■□□□□ 0.58
SSBP3-216ENST00000610401 OR5V1Q9UGF6 321 aa18.7■□□□□ 0.58
SSBP3-216ENST00000610401 KLHDC2Q9Y2U9 406 aa18.7■□□□□ 0.58
SSBP3-216ENST00000610401 OR10H1Q9Y4A9 318 aa18.7■□□□□ 0.58
SSBP3-216ENST00000610401 PCDHGA9Q9Y5G4 932 aaKnown RBP18.7■□□□□ 0.58
SSBP3-216ENST00000610401 MNX1P50219 401 aaPredicted RBP18.7■□□□□ 0.58
SSBP3-216ENST00000610401 ZNF425Q6IV72 752 aa18.7■□□□□ 0.58
SSBP3-216ENST00000610401 PAQR7Q86WK9 346 aa18.7■□□□□ 0.58
SSBP3-216ENST00000610401 GLB1L2Q8IW92 636 aa18.7■□□□□ 0.58
SSBP3-216ENST00000610401 OR4C3Q8NH37 302 aa18.7■□□□□ 0.58
SSBP3-216ENST00000610401 TNFAIP8L1Q8WVP5 186 aa18.7■□□□□ 0.58
SSBP3-216ENST00000610401 RERGQ96A58 199 aaPredicted RBP18.7■□□□□ 0.58
SSBP3-216ENST00000610401 S100A16Q96FQ6 103 aaKnown RBP18.7■□□□□ 0.58
SSBP3-216ENST00000610401 ADAD1Q96M93 576 aaKnown RBP18.7■□□□□ 0.58
SSBP3-216ENST00000610401 CCDC3Q9BQI4 270 aa18.7■□□□□ 0.58
SSBP3-216ENST00000610401 LYARQ9NX58 379 aaKnown RBP18.7■□□□□ 0.58
SSBP3-216ENST00000610401 COLEC10Q9Y6Z7 277 aa18.7■□□□□ 0.58
SSBP3-216ENST00000610401 SC5DO75845 299 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 LYPD3O95274 346 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 APOC3P02656 99 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 LPLP06858 475 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 RRASP10301 218 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms