RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 EMC3Q9P0I2 261 aa16.96■□□□□ 0.31
SGMS1-208ENST00000608287 RPS6KB2Q9UBS0 482 aa16.96■□□□□ 0.31
SGMS1-208ENST00000608287 SLC13A4Q9UKG4 626 aa16.96■□□□□ 0.31
SGMS1-208ENST00000608287 CAPN7Q9Y6W3 813 aa16.96■□□□□ 0.31
SGMS1-208ENST00000608287 ZNF724A8MTY0 619 aa16.95■□□□□ 0.3
SGMS1-208ENST00000608287 BBIP1A8MTZ0 92 aa16.95■□□□□ 0.3
SGMS1-208ENST00000608287 EIF1BO60739 113 aaKnown RBP16.95■□□□□ 0.3
SGMS1-208ENST00000608287 HNF1AP20823 631 aa16.95■□□□□ 0.3
SGMS1-208ENST00000608287 COQ5Q5HYK3 327 aa16.95■□□□□ 0.3
SGMS1-208ENST00000608287 NANOGP8Q6NSW7 305 aa16.95■□□□□ 0.3
SGMS1-208ENST00000608287 GALNT5Q7Z7M9 940 aa16.95■□□□□ 0.3
SGMS1-208ENST00000608287 COMTD1Q86VU5 262 aa16.95■□□□□ 0.3
SGMS1-208ENST00000608287 CCDC103Q8IW40 242 aa16.95■□□□□ 0.3
SGMS1-208ENST00000608287 BHLHE22Q8NFJ8 381 aaPredicted RBP16.95■□□□□ 0.3
SGMS1-208ENST00000608287 C3orf49Q96BT1 292 aa16.95■□□□□ 0.3
SGMS1-208ENST00000608287 LRRC58Q96CX6 371 aa16.95■□□□□ 0.3
SGMS1-208ENST00000608287 NAA11Q9BSU3 229 aaPredicted RBP16.95■□□□□ 0.3
SGMS1-208ENST00000608287 POTEKPQ9BYX7 375 aa16.95■□□□□ 0.3
SGMS1-208ENST00000608287 PIF1Q9H611 641 aa16.95■□□□□ 0.3
SGMS1-208ENST00000608287 NANOGQ9H9S0 305 aa16.95■□□□□ 0.3
SGMS1-208ENST00000608287 ARMCX1Q9P291 453 aa16.95■□□□□ 0.3
SGMS1-208ENST00000608287 MAGED1Q9Y5V3 778 aaPredicted RBP16.95■□□□□ 0.3
SGMS1-208ENST00000608287 ZNF716A6NP11 495 aa16.94■□□□□ 0.3
SGMS1-208ENST00000608287 A8MVM7 634 aa16.94■□□□□ 0.3
SGMS1-208ENST00000608287 ZNF814B7Z6K7 855 aa16.94■□□□□ 0.3
SGMS1-208ENST00000608287 SPRY1O43609 319 aaPredicted RBP16.94■□□□□ 0.3
SGMS1-208ENST00000608287 GPIP06744 558 aa16.94■□□□□ 0.3
SGMS1-208ENST00000608287 SOD3P08294 240 aa16.94■□□□□ 0.3
SGMS1-208ENST00000608287 OR3A2P47893 321 aa16.94■□□□□ 0.3
SGMS1-208ENST00000608287 NCALDP61601 193 aa16.94■□□□□ 0.3
SGMS1-208ENST00000608287 LOXL1Q08397 574 aaPredicted RBP16.94■□□□□ 0.3
SGMS1-208ENST00000608287 CEACAM7Q14002 265 aa16.94■□□□□ 0.3
SGMS1-208ENST00000608287 PDK3Q15120 406 aa16.94■□□□□ 0.3
SGMS1-208ENST00000608287 OR7A5Q15622 319 aa16.94■□□□□ 0.3
SGMS1-208ENST00000608287 CYB5R2Q6BCY4 276 aa16.94■□□□□ 0.3
SGMS1-208ENST00000608287 CLEC2AQ6UVW9 174 aa16.94■□□□□ 0.3
SGMS1-208ENST00000608287 NET1Q7Z628 596 aaPredicted RBP16.94■□□□□ 0.3
SGMS1-208ENST00000608287 ATG4DQ86TL0 474 aaPredicted RBP16.94■□□□□ 0.3
SGMS1-208ENST00000608287 ZNF100Q8IYN0 542 aa16.94■□□□□ 0.3
SGMS1-208ENST00000608287 SMYD1Q8NB12 490 aa16.94■□□□□ 0.3
SGMS1-208ENST00000608287 PCYOX1LQ8NBM8 494 aa16.94■□□□□ 0.3
SGMS1-208ENST00000608287 STEAP2Q8NFT2 490 aa16.94■□□□□ 0.3
SGMS1-208ENST00000608287 ADAD1Q96M93 576 aaKnown RBP16.94■□□□□ 0.3
SGMS1-208ENST00000608287 SH3GL1Q99961 368 aa16.94■□□□□ 0.3
SGMS1-208ENST00000608287 USB1Q9BQ65 265 aaKnown RBP16.94■□□□□ 0.3
SGMS1-208ENST00000608287 NOSIPQ9Y314 301 aaKnown RBP16.94■□□□□ 0.3
SGMS1-208ENST00000608287 IGKV3D-15A0A087WSY6 115 aa16.93■□□□□ 0.3
SGMS1-208ENST00000608287 ELOA3DA6NLF2 546 aaPredicted RBP16.93■□□□□ 0.3
SGMS1-208ENST00000608287 CLOCKO15516 846 aa16.93■□□□□ 0.3
SGMS1-208ENST00000608287 RAMP1O60894 148 aa16.93■□□□□ 0.3
SGMS1-208ENST00000608287 GCM2O75603 506 aaPredicted RBP16.93■□□□□ 0.3
SGMS1-208ENST00000608287 MFN2O95140 757 aa16.93■□□□□ 0.3
SGMS1-208ENST00000608287 NPPAP01160 153 aa16.93■□□□□ 0.3
SGMS1-208ENST00000608287 SLC25A16P16260 332 aa16.93■□□□□ 0.3
SGMS1-208ENST00000608287 PSMB1P20618 241 aaKnown RBP16.93■□□□□ 0.3
SGMS1-208ENST00000608287 PCBP3P57721 371 aaKnown RBP16.93■□□□□ 0.3
SGMS1-208ENST00000608287 RGS8P57771 180 aaPredicted RBP16.93■□□□□ 0.3
SGMS1-208ENST00000608287 H3F3AP84243 136 aa16.93■□□□□ 0.3
SGMS1-208ENST00000608287 ELOA3BQ3SY89 546 aa16.93■□□□□ 0.3
SGMS1-208ENST00000608287 RABL3Q5HYI8 236 aa16.93■□□□□ 0.3
SGMS1-208ENST00000608287 SLC30A8Q8IWU4 369 aa16.93■□□□□ 0.3
SGMS1-208ENST00000608287 GABRG1Q8N1C3 465 aa16.93■□□□□ 0.3
SGMS1-208ENST00000608287 ELOA3Q8NG57 546 aa16.93■□□□□ 0.3
SGMS1-208ENST00000608287 OR52E4Q8NGH9 312 aa16.93■□□□□ 0.3
SGMS1-208ENST00000608287 ECSITQ9BQ95 431 aa16.93■□□□□ 0.3
SGMS1-208ENST00000608287 PRR14Q9BWN1 585 aa16.93■□□□□ 0.3
SGMS1-208ENST00000608287 TAPBPLQ9BX59 468 aa16.93■□□□□ 0.3
SGMS1-208ENST00000608287 HDHD5Q9BXW7 423 aa16.93■□□□□ 0.3
SGMS1-208ENST00000608287 TRIM2Q9C040 744 aa16.93■□□□□ 0.3
SGMS1-208ENST00000608287 GID8Q9NWU2 228 aa16.93■□□□□ 0.3
SGMS1-208ENST00000608287 PRSS50Q9UI38 385 aa16.93■□□□□ 0.3
SGMS1-208ENST00000608287 FREM1Q5H8C1 2179 aa16.93■□□□□ 0.3
SGMS1-208ENST00000608287 LIPT2A6NK58 231 aa16.92■□□□□ 0.3
SGMS1-208ENST00000608287 TMEM229AB2RXF0 380 aa16.92■□□□□ 0.3
SGMS1-208ENST00000608287 M0QX08 132 aa16.92■□□□□ 0.3
SGMS1-208ENST00000608287 FXYD1O00168 92 aa16.92■□□□□ 0.3
SGMS1-208ENST00000608287 GPR171O14626 319 aa16.92■□□□□ 0.3
SGMS1-208ENST00000608287 SLC22A2O15244 555 aa16.92■□□□□ 0.3
SGMS1-208ENST00000608287 AKR7A3O95154 331 aa16.92■□□□□ 0.3
SGMS1-208ENST00000608287 ADAP00813 363 aa16.92■□□□□ 0.3
SGMS1-208ENST00000608287 OPN1SWP03999 348 aa16.92■□□□□ 0.3
SGMS1-208ENST00000608287 EDNRAP25101 427 aa16.92■□□□□ 0.3
SGMS1-208ENST00000608287 HTR2AP28223 471 aa16.92■□□□□ 0.3
SGMS1-208ENST00000608287 PCGF2P35227 344 aa16.92■□□□□ 0.3
SGMS1-208ENST00000608287 NUDT6P53370 316 aa16.92■□□□□ 0.3
SGMS1-208ENST00000608287 TSC22D1Q15714 1073 aa16.92■□□□□ 0.3
SGMS1-208ENST00000608287 ZNF672Q499Z4 452 aaPredicted RBP16.92■□□□□ 0.3
SGMS1-208ENST00000608287 OTUD3Q5T2D3 398 aaPredicted RBP16.92■□□□□ 0.3
SGMS1-208ENST00000608287 INTS11Q5TA45 600 aaKnown RBP16.92■□□□□ 0.3
SGMS1-208ENST00000608287 C1orf140Q5VVS0 124 aa16.92■□□□□ 0.3
SGMS1-208ENST00000608287 PAQR6Q6TCH4 344 aa16.92■□□□□ 0.3
SGMS1-208ENST00000608287 PATL1Q86TB9 770 aaKnown RBP16.92■□□□□ 0.3
SGMS1-208ENST00000608287 LSMEM1Q8N8F7 131 aa16.92■□□□□ 0.3
SGMS1-208ENST00000608287 OR8J3Q8NGG0 315 aa16.92■□□□□ 0.3
SGMS1-208ENST00000608287 RNF217Q8TC41 542 aa16.92■□□□□ 0.3
SGMS1-208ENST00000608287 STK35Q8TDR2 534 aa16.92■□□□□ 0.3
SGMS1-208ENST00000608287 ELAC2Q9BQ52 826 aaKnown RBP16.92■□□□□ 0.3
SGMS1-208ENST00000608287 ADPRHL2Q9NX46 363 aa16.92■□□□□ 0.3
SGMS1-208ENST00000608287 TESQ9UGI8 421 aaKnown RBP16.92■□□□□ 0.3
SGMS1-208ENST00000608287 A0A1B0GWA3 101 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms