RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 NSA2O95478 260 aaKnown RBP10.56□□□□□ -0.72
ARHGEF1-220ENST00000600274 SRFP11831 508 aa10.56□□□□□ -0.72
ARHGEF1-220ENST00000600274 CD27P26842 260 aa10.56□□□□□ -0.72
ARHGEF1-220ENST00000600274 ETV6P41212 452 aa10.56□□□□□ -0.72
ARHGEF1-220ENST00000600274 HNRNPKP61978 463 aaKnown RBP eCLIP10.56□□□□□ -0.721e-11■■■■■ 45.3
ARHGEF1-220ENST00000600274 GALEQ14376 348 aa10.56□□□□□ -0.72
ARHGEF1-220ENST00000600274 VASNQ6EMK4 673 aa10.56□□□□□ -0.72
ARHGEF1-220ENST00000600274 MZT2BQ6NZ67 158 aa10.56□□□□□ -0.72
ARHGEF1-220ENST00000600274 ZCCHC12Q6PEW1 402 aa10.56□□□□□ -0.72
ARHGEF1-220ENST00000600274 LANCL3Q6ZV70 420 aa10.56□□□□□ -0.72
ARHGEF1-220ENST00000600274 BEST4Q8NFU0 473 aa10.56□□□□□ -0.72
ARHGEF1-220ENST00000600274 TRMT10AQ8TBZ6 339 aaKnown RBP10.56□□□□□ -0.72
ARHGEF1-220ENST00000600274 KISS1RQ969F8 398 aaPredicted RBP10.56□□□□□ -0.72
ARHGEF1-220ENST00000600274 ST6GAL2Q96JF0 529 aa10.56□□□□□ -0.72
ARHGEF1-220ENST00000600274 CNN2Q99439 309 aaKnown RBP10.56□□□□□ -0.72
ARHGEF1-220ENST00000600274 TBL1XR1Q9BZK7 514 aa10.56□□□□□ -0.72
ARHGEF1-220ENST00000600274 RNF121Q9H920 327 aa10.56□□□□□ -0.72
ARHGEF1-220ENST00000600274 SLC6A5Q9Y345 797 aa10.56□□□□□ -0.72
ARHGEF1-220ENST00000600274 OR6C68A6NDL8 312 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 ZNF217O75362 1048 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 IGHA1P01876 353 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 CD3GP09693 182 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 OR8G3PP0DMU2 310 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 UBL4AP11441 157 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 NME1P15531 152 aaKnown RBP10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 RPS4Y1P22090 263 aaKnown RBP10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 GPR3P46089 330 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 GDI2P50395 445 aaKnown RBP10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 ZNF85Q03923 595 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 TOMM34Q15785 309 aaPredicted RBP10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 CCDC157Q569K6 752 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 HES5Q5TA89 166 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 FAM69BQ5VUD6 431 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 KANSL1Q7Z3B3 1105 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 MRGPREQ86SM8 312 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 ZDHHC12Q96GR4 267 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 ORAI3Q9BRQ5 295 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 CHIAQ9BZP6 476 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 UBE2ZQ9H832 354 aaPredicted RBP10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 ZC4H2Q9NQZ6 224 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 EXOGQ9Y2C4 368 aaKnown RBP10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 TMEM72A0PK05 275 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 TEX46H3BTG2 121 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 ICOSLGO75144 302 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 UTS2O95399 124 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 CRYZL1O95825 349 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 HIST1H2ABP04908 130 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 EIF4EP06730 217 aaKnown RBP10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 FOLR1P15328 257 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 TACR3P29371 465 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 KIR2DL3P43628 341 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 MAP2K3P46734 347 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 BIKQ13323 160 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 MANEAQ5SRI9 462 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 HIST3H2AQ7L7L0 130 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 SLC35F2Q8IXU6 374 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 OR4M1Q8NGD0 313 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 THEM6Q8WUY1 208 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 DNAJA4Q8WW22 397 aaPredicted RBP10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 THAP4Q8WY91 577 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 SLC7A6Q92536 515 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 HIST1H2ACQ93077 130 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 C3orf49Q96BT1 292 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 NUDT22Q9BRQ3 303 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 PHF7Q9BWX1 381 aaPredicted RBP10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 ZNF224Q9NZL3 707 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 ZMIZ1Q9ULJ6 1067 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 GPR143P51810 404 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 GBX2P52951 348 aaPredicted RBP10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 LSM14AQ8ND56 463 aaKnown RBP10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 OR6N2Q8NGY6 317 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 HSD17B8Q92506 261 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 MRPS18AQ9NVS2 196 aaKnown RBP10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 COPS3Q9UNS2 423 aa10.55□□□□□ -0.72
ARHGEF1-220ENST00000600274 KNTC1P50748 2209 aa10.54□□□□□ -0.72
ARHGEF1-220ENST00000600274 TLCD2A6NGC4 264 aa10.54□□□□□ -0.72
ARHGEF1-220ENST00000600274 METTL12A8MUP2 240 aa10.54□□□□□ -0.72
ARHGEF1-220ENST00000600274 SSTR2P30874 369 aa10.54□□□□□ -0.72
ARHGEF1-220ENST00000600274 PLCXD2Q0VAA5 305 aa10.54□□□□□ -0.72
ARHGEF1-220ENST00000600274 FGFBP1Q14512 234 aa10.54□□□□□ -0.72
ARHGEF1-220ENST00000600274 ALG10Q5BKT4 473 aa10.54□□□□□ -0.72
ARHGEF1-220ENST00000600274 ARIH2OSQ8N7S6 290 aa10.54□□□□□ -0.72
ARHGEF1-220ENST00000600274 OR4D9Q8NGE8 314 aa10.54□□□□□ -0.72
ARHGEF1-220ENST00000600274 CHAC2Q8WUX2 184 aa10.54□□□□□ -0.72
ARHGEF1-220ENST00000600274 KTI12Q96EK9 354 aaPredicted RBP10.54□□□□□ -0.72
ARHGEF1-220ENST00000600274 ADAD1Q96M93 576 aaKnown RBP10.54□□□□□ -0.72
ARHGEF1-220ENST00000600274 ERVMER34-1Q9H9K5 563 aa10.54□□□□□ -0.72
ARHGEF1-220ENST00000600274 CTSFQ9UBX1 484 aa10.54□□□□□ -0.72
ARHGEF1-220ENST00000600274 HMX3A6NHT5 357 aa10.54□□□□□ -0.72
ARHGEF1-220ENST00000600274 INMT-MINDY4F8WBC2 141 aa10.54□□□□□ -0.72
ARHGEF1-220ENST00000600274 ZNF749O43361 778 aa10.54□□□□□ -0.72
ARHGEF1-220ENST00000600274 SLC25A12O75746 678 aa10.54□□□□□ -0.72
ARHGEF1-220ENST00000600274 F8A1P23610 371 aa10.54□□□□□ -0.72
ARHGEF1-220ENST00000600274 CXCR1P25024 350 aa10.54□□□□□ -0.72
ARHGEF1-220ENST00000600274 DHPSP49366 369 aaPredicted RBP10.54□□□□□ -0.72
ARHGEF1-220ENST00000600274 LGALS3BPQ08380 585 aa10.54□□□□□ -0.72
ARHGEF1-220ENST00000600274 GLYR1Q49A26 553 aaPredicted RBP10.54□□□□□ -0.72
ARHGEF1-220ENST00000600274 RPL13AP3Q6NVV1 102 aa10.54□□□□□ -0.72
ARHGEF1-220ENST00000600274 SFXN4Q6P4A7 337 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms