RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 CDH2P19022 906 aaPredicted RBP12.81□□□□□ -0.36
IRF3-223ENST00000599223 NCF2P19878 526 aaPredicted RBP12.81□□□□□ -0.36
IRF3-223ENST00000599223 MPGP29372 298 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 SLC1A3P43003 542 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 MVDP53602 400 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 DSCR9P59020 149 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 BNIP2Q12982 314 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 CEACAM7Q14002 265 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 OR7A5Q15622 319 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 ZNF836Q6ZNA1 936 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 LRRC74BQ6ZQY2 392 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 LINGO2Q7L985 606 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 VRK2Q86Y07 508 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 VPS37AQ8NEZ2 397 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 SORCS2Q96PQ0 1159 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 ALKBH3Q96Q83 286 aaPredicted RBP12.81□□□□□ -0.36
IRF3-223ENST00000599223 PANX1Q96RD7 426 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 ADAM19Q9H013 955 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 SEC61A2Q9H9S3 476 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 CDC42EP3Q9UKI2 254 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 MOKQ9UQ07 419 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 DSPPQ9NZW4 1301 aa12.81□□□□□ -0.36
IRF3-223ENST00000599223 IGHV1-18A0A0C4DH31 117 aa12.8□□□□□ -0.36
IRF3-223ENST00000599223 CDHR4A6H8M9 788 aa12.8□□□□□ -0.36
IRF3-223ENST00000599223 AQP7P3A6NL99 342 aa12.8□□□□□ -0.36
IRF3-223ENST00000599223 FRS3O43559 492 aa12.8□□□□□ -0.36
IRF3-223ENST00000599223 EIF1BO60739 113 aaKnown RBP12.8□□□□□ -0.36
IRF3-223ENST00000599223 PGRP06401 933 aa12.8□□□□□ -0.36
IRF3-223ENST00000599223 PRG2P13727 222 aa12.8□□□□□ -0.36
IRF3-223ENST00000599223 IGFBP5P24593 272 aa12.8□□□□□ -0.36
IRF3-223ENST00000599223 FKBP2P26885 142 aaKnown RBP12.8□□□□□ -0.36
IRF3-223ENST00000599223 ACAA2P42765 397 aaKnown RBP12.8□□□□□ -0.36
IRF3-223ENST00000599223 MNAT1P51948 309 aa12.8□□□□□ -0.36
IRF3-223ENST00000599223 EFNA4P52798 201 aa12.8□□□□□ -0.36
IRF3-223ENST00000599223 SRSF2Q01130 221 aaKnown RBP12.8□□□□□ -0.36
IRF3-223ENST00000599223 KRT72Q14CN4 511 aa12.8□□□□□ -0.36
IRF3-223ENST00000599223 SWI5Q1ZZU3 235 aa12.8□□□□□ -0.36
IRF3-223ENST00000599223 KRTAP24-1Q3LI83 254 aa12.8□□□□□ -0.36
IRF3-223ENST00000599223 RPS26P11Q5JNZ5 115 aaPredicted RBP12.8□□□□□ -0.36
IRF3-223ENST00000599223 DEPDC4Q8N2C3 294 aa12.8□□□□□ -0.36
IRF3-223ENST00000599223 OR52E6Q96RD3 313 aa12.8□□□□□ -0.36
IRF3-223ENST00000599223 EBF4Q9BQW3 602 aa12.8□□□□□ -0.36
IRF3-223ENST00000599223 NAA11Q9BSU3 229 aaPredicted RBP12.8□□□□□ -0.36
IRF3-223ENST00000599223 NELFAQ9H3P2 528 aa12.8□□□□□ -0.36
IRF3-223ENST00000599223 FKRPQ9H9S5 495 aa12.8□□□□□ -0.36
IRF3-223ENST00000599223 CHST2Q9Y4C5 530 aa12.8□□□□□ -0.36
IRF3-223ENST00000599223 GPR45Q9Y5Y3 372 aa12.8□□□□□ -0.36
IRF3-223ENST00000599223 SLC35F4A4IF30 521 aa12.79□□□□□ -0.36
IRF3-223ENST00000599223 VWC2LB2RUY7 222 aa12.79□□□□□ -0.36
IRF3-223ENST00000599223 LGI1O95970 557 aa12.79□□□□□ -0.36
IRF3-223ENST00000599223 DBIP07108 87 aaKnown RBP12.79□□□□□ -0.36
IRF3-223ENST00000599223 NR2F1P10589 423 aa12.79□□□□□ -0.36
IRF3-223ENST00000599223 IL7RP16871 459 aa12.79□□□□□ -0.36
IRF3-223ENST00000599223 APOBEC3AP31941 199 aaPredicted RBP12.79□□□□□ -0.36
IRF3-223ENST00000599223 SELENOPP49908 381 aa12.79□□□□□ -0.36
IRF3-223ENST00000599223 TUBA1BP68363 451 aa12.79□□□□□ -0.36
IRF3-223ENST00000599223 TUBA4AP68366 448 aa12.79□□□□□ -0.36
IRF3-223ENST00000599223 GTDC1Q4AE62 458 aa12.79□□□□□ -0.36
IRF3-223ENST00000599223 SLC9B1Q4ZJI4 515 aa12.79□□□□□ -0.36
IRF3-223ENST00000599223 FAM91A1Q658Y4 838 aa12.79□□□□□ -0.36
IRF3-223ENST00000599223 ZNF621Q6ZSS3 439 aa12.79□□□□□ -0.36
IRF3-223ENST00000599223 IL17RELQ6ZVW7 336 aa12.79□□□□□ -0.36
IRF3-223ENST00000599223 TUBA1AQ71U36 451 aa12.79□□□□□ -0.36
IRF3-223ENST00000599223 AAED1Q7RTV5 226 aa12.79□□□□□ -0.36
IRF3-223ENST00000599223 GPAT4Q86UL3 456 aa12.79□□□□□ -0.36
IRF3-223ENST00000599223 MYPOPQ86VE0 399 aaPredicted RBP12.79□□□□□ -0.36
IRF3-223ENST00000599223 TMEM158Q8WZ71 300 aa12.79□□□□□ -0.36
IRF3-223ENST00000599223 PMM1Q92871 262 aa12.79□□□□□ -0.36
IRF3-223ENST00000599223 FBXO17Q96EF6 278 aa12.79□□□□□ -0.36
IRF3-223ENST00000599223 KCNK17Q96T54 332 aa12.79□□□□□ -0.36
IRF3-223ENST00000599223 WDR55Q9H6Y2 383 aaPredicted RBP12.79□□□□□ -0.36
IRF3-223ENST00000599223 PARPBPQ9NWS1 579 aa12.79□□□□□ -0.36
IRF3-223ENST00000599223 ADPRHL2Q9NX46 363 aa12.79□□□□□ -0.36
IRF3-223ENST00000599223 SLC22A2O15244 555 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 GPIP06744 558 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 CSF3P09919 207 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 ETFAP13804 333 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 USF1P22415 310 aaPredicted RBP12.78□□□□□ -0.36
IRF3-223ENST00000599223 CALB2P22676 271 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 EPHA3P29320 983 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 PRPS1P60891 318 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 STX1BP61266 288 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 TGFBR3Q03167 851 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 BNIP1Q12981 228 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 GGTLC2Q14390 218 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 TBRG1Q3YBR2 411 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 KLHL24Q6TFL4 600 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 MAVSQ7Z434 540 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 CLIP4Q8N3C7 705 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 CADM2Q8N3J6 435 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 TRIML2Q8N7C3 387 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 OR1K1Q8NGR3 316 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 PROX1Q92786 737 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 VPS33AQ96AX1 596 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 CMTM5Q96DZ9 223 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 AURKBQ96GD4 344 aaPredicted RBP12.78□□□□□ -0.36
IRF3-223ENST00000599223 NSL1Q96IY1 281 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 SF3B5Q9BWJ5 86 aaKnown RBP12.78□□□□□ -0.36
IRF3-223ENST00000599223 PRR14Q9BWN1 585 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 MTHFD2LQ9H903 347 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms