RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 IFITM5A6NNB3 132 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 ZNF593O00488 134 aaPredicted RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 CDK2AP1O14519 115 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 RNGTTO60942 597 aaKnown RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 CDC123O75794 336 aaPredicted RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 SPDEFO95238 335 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 AHSA1O95433 338 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 CD160O95971 181 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 S100A8P05109 93 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 PROS1P07225 676 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 RHOP08100 348 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 CHRM4P08173 479 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 IFI6P09912 130 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 PGCP20142 388 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 HOXC5Q00444 222 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 PTPRRQ15256 657 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 MRPL2Q5T653 305 aaKnown RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 TMEM244Q5VVB8 128 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 FCRL6Q6DN72 434 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 NLRC3Q7RTR2 1065 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 TAS1R1Q7RTX1 841 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 MAMDC2Q7Z304 686 aaPredicted RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 FAM122BQ7Z309 247 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 MRGPREQ86SM8 312 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 RASGRP3Q8IV61 690 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 OR2L13Q8N349 312 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 ARL14Q8N4G2 192 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 JAGN1Q8N5M9 183 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 CLRN3Q8NCR9 226 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 MORN4Q8NDC4 146 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 OR10K1Q8NGX5 313 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 OR2AJ1Q8NGZ0 328 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 WFDC5Q8TCV5 224 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 ZBTB8AQ96BR9 441 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 EID2BQ96D98 161 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 RSPRY1Q96DX4 576 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 ZMYND19Q96E35 227 aaPredicted RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 DDOQ99489 341 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 GPER1Q99527 375 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 ZFYVE21Q9BQ24 234 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 SMG9Q9H0W8 520 aaKnown RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 OR52A5Q9H2C5 316 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 SAV1Q9H4B6 383 aaPredicted RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 C5AR2Q9P296 337 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 C19orf53Q9UNZ5 99 aaPredicted RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 HRH3Q9Y5N1 445 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 IER3IP1Q9Y5U9 82 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 PTPRZ1P23471 2315 aaPredicted RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 ACOD1A6NK06 481 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 FAM183AA6NL82 134 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 BLOC1S5-TXNDC5H3BN57 136 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 AGRPO00253 132 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 TAAR5O14804 337 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 ADAM12O43184 909 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 SSX4O60224 188 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 NDUFB6O95139 128 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 PLATP00750 562 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 IFNA4P05014 189 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 RBMXP38159 391 aaKnown RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 ACTR1BP42025 376 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 DIO1P49895 249 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 CCR6P51684 374 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 EPHA5P54756 1037 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 ACTR1AP61163 376 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 DGCR2P98153 550 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 EGR3Q06889 387 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 ALKBH1Q13686 389 aaKnown RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 CRMP1Q14194 572 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.27□□□□□ -1.89
VMP1-216ENST00000592790 CCSMST1Q4G0I0 132 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 CDONQ4KMG0 1287 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 ALG10Q5BKT4 473 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 LAIR1Q6GTX8 287 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 IL20RBQ6UXL0 311 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 ZNF836Q6ZNA1 936 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 BCDIN3DQ7Z5W3 292 aaKnown RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 GPAT4Q86UL3 456 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 RBM45Q8IUH3 476 aaKnown RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 C10orf111Q8N326 155 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 STEAP2Q8NFT2 490 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 OR4E2Q8NGC2 313 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 OR6M1Q8NGM8 313 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 RNASE11Q8TAA1 199 aaKnown RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 TMEM255BQ8WV15 326 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 FOXJ1Q92949 421 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 NXPE3Q969Y0 559 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 ARMC5Q96C12 935 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 MS4A6EQ96DS6 147 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 WDR92Q96MX6 357 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 SDHCQ99643 169 aaPredicted RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 SLC46A2Q9BY10 475 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 NKX6-2Q9C056 277 aaPredicted RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 ZNF350Q9GZX5 532 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 NARFLQ9H6Q4 476 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 KIR3DX1Q9H7L2 352 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 NCDNQ9UBB6 729 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 FBXO10Q9UK96 956 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 GABRQQ9UN88 632 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 YARS2Q9Y2Z4 477 aaKnown RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 FNDC1Q4ZHG4 1894 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms