RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 ERCC1P07992 297 aaPredicted RBP12.16□□□□□ -0.46
VMP1-209ENST00000588915 TACSTD2P09758 323 aa12.16□□□□□ -0.46
VMP1-209ENST00000588915 TFPTP0C1Z6 253 aa12.16□□□□□ -0.46
VMP1-209ENST00000588915 CREB1P16220 341 aa12.16□□□□□ -0.46
VMP1-209ENST00000588915 CDH2P19022 906 aaPredicted RBP12.16□□□□□ -0.46
VMP1-209ENST00000588915 ACAA2P42765 397 aaKnown RBP12.16□□□□□ -0.46
VMP1-209ENST00000588915 P2RY4P51582 365 aa12.16□□□□□ -0.46
VMP1-209ENST00000588915 ADIPOQQ15848 244 aa12.16□□□□□ -0.46
VMP1-209ENST00000588915 GPAT4Q86UL3 456 aa12.16□□□□□ -0.46
VMP1-209ENST00000588915 IL17RDQ8NFM7 739 aa12.16□□□□□ -0.46
VMP1-209ENST00000588915 STK35Q8TDR2 534 aa12.16□□□□□ -0.46
VMP1-209ENST00000588915 PPP1R36Q96LQ0 422 aa12.16□□□□□ -0.46
VMP1-209ENST00000588915 TMEM109Q9BVC6 243 aa12.16□□□□□ -0.46
VMP1-209ENST00000588915 BPESC1Q9GZL8 116 aa12.16□□□□□ -0.46
VMP1-209ENST00000588915 CALML5Q9NZT1 146 aa12.16□□□□□ -0.46
VMP1-209ENST00000588915 NPIPB7O75200 414 aa12.15□□□□□ -0.46
VMP1-209ENST00000588915 LGI1O95970 557 aa12.15□□□□□ -0.46
VMP1-209ENST00000588915 CBR1P16152 277 aa12.15□□□□□ -0.46
VMP1-209ENST00000588915 SELENOPP49908 381 aa12.15□□□□□ -0.46
VMP1-209ENST00000588915 CHN2P52757 468 aa12.15□□□□□ -0.46
VMP1-209ENST00000588915 CHI3L2Q15782 390 aa12.15□□□□□ -0.46
VMP1-209ENST00000588915 CR1LQ2VPA4 569 aa12.15□□□□□ -0.46
VMP1-209ENST00000588915 LIN52Q52LA3 116 aa12.15□□□□□ -0.46
VMP1-209ENST00000588915 ZNF621Q6ZSS3 439 aa12.15□□□□□ -0.46
VMP1-209ENST00000588915 SPATA19Q7Z5L4 167 aa12.15□□□□□ -0.46
VMP1-209ENST00000588915 CCDC36Q8IYA8 594 aa12.15□□□□□ -0.46
VMP1-209ENST00000588915 ANKS4BQ8N8V4 417 aa12.15□□□□□ -0.46
VMP1-209ENST00000588915 OR52P1PQ8NH57 321 aa12.15□□□□□ -0.46
VMP1-209ENST00000588915 MFSD8Q8NHS3 518 aa12.15□□□□□ -0.46
VMP1-209ENST00000588915 C3orf49Q96BT1 292 aa12.15□□□□□ -0.46
VMP1-209ENST00000588915 ANKRD27Q96NW4 1050 aa12.15□□□□□ -0.46
VMP1-209ENST00000588915 DOK1Q99704 481 aa12.15□□□□□ -0.46
VMP1-209ENST00000588915 ARMC7Q9H6L4 198 aa12.15□□□□□ -0.46
VMP1-209ENST00000588915 MEAF6Q9HAF1 191 aa12.15□□□□□ -0.46
VMP1-209ENST00000588915 SSU72Q9NP77 194 aaKnown RBP12.15□□□□□ -0.46
VMP1-209ENST00000588915 ZNF232Q9UNY5 417 aa12.15□□□□□ -0.46
VMP1-209ENST00000588915 PCDHB14Q9Y5E9 798 aa12.15□□□□□ -0.46
VMP1-209ENST00000588915 DSPPQ9NZW4 1301 aa12.14□□□□□ -0.47
VMP1-209ENST00000588915 FRS3O43559 492 aa12.14□□□□□ -0.47
VMP1-209ENST00000588915 CECR9P0C854 216 aa12.14□□□□□ -0.47
VMP1-209ENST00000588915 PCMT1P22061 227 aa12.14□□□□□ -0.47
VMP1-209ENST00000588915 SLC1A6P48664 564 aa12.14□□□□□ -0.47
VMP1-209ENST00000588915 POU3F1Q03052 451 aaPredicted RBP12.14□□□□□ -0.47
VMP1-209ENST00000588915 LARS2Q15031 903 aaKnown RBP12.14□□□□□ -0.47
VMP1-209ENST00000588915 CARTPTQ16568 116 aa12.14□□□□□ -0.47
VMP1-209ENST00000588915 RNF220Q5VTB9 566 aa12.14□□□□□ -0.47
VMP1-209ENST00000588915 C1orf140Q5VVS0 124 aa12.14□□□□□ -0.47
VMP1-209ENST00000588915 PRAMEF8Q5VWM4 474 aa12.14□□□□□ -0.47
VMP1-209ENST00000588915 PRAMEF7Q5VXH5 474 aa12.14□□□□□ -0.47
VMP1-209ENST00000588915 EPHX4Q8IUS5 362 aa12.14□□□□□ -0.47
VMP1-209ENST00000588915 ZNF786Q8N393 782 aa12.14□□□□□ -0.47
VMP1-209ENST00000588915 GLB1L3Q8NCI6 653 aaPredicted RBP12.14□□□□□ -0.47
VMP1-209ENST00000588915 SLC35B4Q969S0 331 aa12.14□□□□□ -0.47
VMP1-209ENST00000588915 OR52E6Q96RD3 313 aa12.14□□□□□ -0.47
VMP1-209ENST00000588915 SORT1Q99523 831 aa12.14□□□□□ -0.47
VMP1-209ENST00000588915 NUF2Q9BZD4 464 aa12.14□□□□□ -0.47
VMP1-209ENST00000588915 C20orf27Q9GZN8 174 aa12.14□□□□□ -0.47
VMP1-209ENST00000588915 RLIMQ9NVW2 624 aa12.14□□□□□ -0.47
VMP1-209ENST00000588915 ADPRHL2Q9NX46 363 aa12.14□□□□□ -0.47
VMP1-209ENST00000588915 THUMPD1Q9NXG2 353 aaKnown RBP12.14□□□□□ -0.47
VMP1-209ENST00000588915 P2RX2Q9UBL9 471 aa12.14□□□□□ -0.47
VMP1-209ENST00000588915 RCE1Q9Y256 329 aa12.14□□□□□ -0.47
VMP1-209ENST00000588915 TMEM229AB2RXF0 380 aa12.13□□□□□ -0.47
VMP1-209ENST00000588915 TM9SF1O15321 606 aa12.13□□□□□ -0.47
VMP1-209ENST00000588915 TCF21O43680 179 aa12.13□□□□□ -0.47
VMP1-209ENST00000588915 LILRA1O75019 489 aa12.13□□□□□ -0.47
VMP1-209ENST00000588915 FZD7O75084 574 aa12.13□□□□□ -0.47
VMP1-209ENST00000588915 C1QCP02747 245 aa12.13□□□□□ -0.47
VMP1-209ENST00000588915 GKN3PP0CG01 181 aa12.13□□□□□ -0.47
VMP1-209ENST00000588915 DAOP14920 347 aa12.13□□□□□ -0.47
VMP1-209ENST00000588915 NPR2P20594 1047 aa12.13□□□□□ -0.47
VMP1-209ENST00000588915 ARR3P36575 388 aa12.13□□□□□ -0.47
VMP1-209ENST00000588915 CRISP3P54108 245 aa12.13□□□□□ -0.47
VMP1-209ENST00000588915 UFM1P61960 85 aa12.13□□□□□ -0.47
VMP1-209ENST00000588915 MAPK11Q15759 364 aa12.13□□□□□ -0.47
VMP1-209ENST00000588915 NIPAL3Q6P499 406 aa12.13□□□□□ -0.47
VMP1-209ENST00000588915 ZNF836Q6ZNA1 936 aa12.13□□□□□ -0.47
VMP1-209ENST00000588915 IL17RELQ6ZVW7 336 aa12.13□□□□□ -0.47
VMP1-209ENST00000588915 CADM2Q8N3J6 435 aa12.13□□□□□ -0.47
VMP1-209ENST00000588915 LINC01356Q8N9X3 169 aa12.13□□□□□ -0.47
VMP1-209ENST00000588915 C1orf159Q96HA4 380 aa12.13□□□□□ -0.47
VMP1-209ENST00000588915 PKNOX2Q96KN3 472 aa12.13□□□□□ -0.47
VMP1-209ENST00000588915 TEX37Q96LM6 180 aa12.13□□□□□ -0.47
VMP1-209ENST00000588915 ALKBH3Q96Q83 286 aaPredicted RBP12.13□□□□□ -0.47
VMP1-209ENST00000588915 NELFAQ9H3P2 528 aa12.13□□□□□ -0.47
VMP1-209ENST00000588915 AIG1Q9NVV5 245 aa12.13□□□□□ -0.47
VMP1-209ENST00000588915 TMEFF2Q9UIK5 374 aaPredicted RBP12.13□□□□□ -0.47
VMP1-209ENST00000588915 IFT52Q9Y366 437 aa12.13□□□□□ -0.47
VMP1-209ENST00000588915 A0A0G2JPF8 293 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 LOC102725191A0A1B0GVB3 256 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 WDR91A4D1P6 747 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 HNRNPCL2B2RXH8 293 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 HNRNPCL3B7ZW38 293 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 FTCDNL1E5RQL4 147 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 NR5A2O00482 541 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 HNRNPCL1O60812 293 aaKnown RBP12.12□□□□□ -0.47
VMP1-209ENST00000588915 UPK3AO75631 287 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 ZNF432O94892 652 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 AHSA1O95433 338 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 ALDOCP09972 364 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms