RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 VSTM5A8MXK1 200 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 HMGB1P1B2RPK0 211 aaPredicted RBP9.88□□□□□ -0.83
ACTN4-209ENST00000586538 TMEM229AB2RXF0 380 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 NR5A2O00482 541 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 AIM2O14862 343 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 RAMP1O60894 148 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 ARAFP10398 606 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 EDNRAP25101 427 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 FABP6P51161 128 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 TNK1Q13470 666 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 RAB35Q15286 201 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 MAPK11Q15759 364 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 GTDC1Q4AE62 458 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 RPS26P11Q5JNZ5 115 aaPredicted RBP9.88□□□□□ -0.83
ACTN4-209ENST00000586538 FAM69AQ5T7M9 428 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 TSPO2Q5TGU0 170 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 HMBOX1Q6NT76 420 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 ULK3Q6PHR2 472 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 SLC2A7Q6PXP3 512 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 BLOC1S3Q6QNY0 202 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 C6orf89Q6UWU4 347 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 ATG4DQ86TL0 474 aaPredicted RBP9.88□□□□□ -0.83
ACTN4-209ENST00000586538 SERPINA11Q86U17 422 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 RANBP3LQ86VV4 465 aaPredicted RBP9.88□□□□□ -0.83
ACTN4-209ENST00000586538 SNX32Q86XE0 403 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 CIARTQ8N365 385 aaPredicted RBP9.88□□□□□ -0.83
ACTN4-209ENST00000586538 TMEM99Q8N816 258 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 LSMEM1Q8N8F7 131 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 OR52E4Q8NGH9 312 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 C3orf49Q96BT1 292 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 ZBTB9Q96C00 473 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 LINC00470Q9BZP3 86 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 TMEM38AQ9H6F2 299 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 SLC6A13Q9NSD5 602 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 INTS9Q9NV88 658 aaKnown RBP9.88□□□□□ -0.83
ACTN4-209ENST00000586538 NPAP1Q9NZP6 1156 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.88□□□□□ -0.83
ACTN4-209ENST00000586538 ANGPT4Q9Y264 503 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 B3GALT5Q9Y2C3 310 aa9.88□□□□□ -0.83
ACTN4-209ENST00000586538 NIPBLQ6KC79 2804 aaeCLIP9.88□□□□□ -0.832e-6■■■■□ 25.1
ACTN4-209ENST00000586538 HIVEP2P31629 2446 aa9.87□□□□□ -0.83
ACTN4-209ENST00000586538 H7C417 338 aa9.87□□□□□ -0.83
ACTN4-209ENST00000586538 TLX2O43763 284 aaPredicted RBP9.87□□□□□ -0.83
ACTN4-209ENST00000586538 NPIPB7O75200 414 aa9.87□□□□□ -0.83
ACTN4-209ENST00000586538 SLC43A1O75387 559 aa9.87□□□□□ -0.83
ACTN4-209ENST00000586538 APOBEC3AP31941 199 aaPredicted RBP9.87□□□□□ -0.83
ACTN4-209ENST00000586538 IDH3AP50213 366 aa9.87□□□□□ -0.83
ACTN4-209ENST00000586538 AQP5P55064 265 aa9.87□□□□□ -0.83
ACTN4-209ENST00000586538 CDK6Q00534 326 aa9.87□□□□□ -0.83
ACTN4-209ENST00000586538 C1DQ13901 141 aaKnown RBP9.87□□□□□ -0.83
ACTN4-209ENST00000586538 C3orf36Q3SXR2 165 aa9.87□□□□□ -0.83
ACTN4-209ENST00000586538 ALG10BQ5I7T1 473 aa9.87□□□□□ -0.83
ACTN4-209ENST00000586538 SWT1Q5T5J6 900 aaKnown RBP9.87□□□□□ -0.83
ACTN4-209ENST00000586538 NIPAL3Q6P499 406 aa9.87□□□□□ -0.83
ACTN4-209ENST00000586538 DHRS4L2Q6PKH6 230 aa9.87□□□□□ -0.83
ACTN4-209ENST00000586538 CREB3L2Q70SY1 520 aa9.87□□□□□ -0.83
ACTN4-209ENST00000586538 SLC30A8Q8IWU4 369 aa9.87□□□□□ -0.83
ACTN4-209ENST00000586538 CCDC36Q8IYA8 594 aa9.87□□□□□ -0.83
ACTN4-209ENST00000586538 CLIP4Q8N3C7 705 aa9.87□□□□□ -0.83
ACTN4-209ENST00000586538 HIPK4Q8NE63 616 aa9.87□□□□□ -0.83
ACTN4-209ENST00000586538 OR6S1Q8NH40 331 aa9.87□□□□□ -0.83
ACTN4-209ENST00000586538 MAGEE2Q8TD90 523 aaPredicted RBP9.87□□□□□ -0.83
ACTN4-209ENST00000586538 NEUROG1Q92886 237 aa9.87□□□□□ -0.83
ACTN4-209ENST00000586538 SLC47A1Q96FL8 570 aa9.87□□□□□ -0.83
ACTN4-209ENST00000586538 CACNG6Q9BXT2 260 aa9.87□□□□□ -0.83
ACTN4-209ENST00000586538 REG4Q9BYZ8 158 aa9.87□□□□□ -0.83
ACTN4-209ENST00000586538 TMEM27Q9HBJ8 222 aa9.87□□□□□ -0.83
ACTN4-209ENST00000586538 LEF1Q9UJU2 399 aaPredicted RBP9.87□□□□□ -0.83
ACTN4-209ENST00000586538 CORINQ9Y5Q5 1042 aa9.87□□□□□ -0.83
ACTN4-209ENST00000586538 FKBP7Q9Y680 259 aa9.87□□□□□ -0.83
ACTN4-209ENST00000586538 USF3Q68DE3 2245 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 NAV3Q8IVL0 2385 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 NSD1Q96L73 2696 aaPredicted RBP9.86□□□□□ -0.83
ACTN4-209ENST00000586538 TRAV36DV7A0A075B6V5 113 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 ARPC4-TTLL3A0A0A6YYG9 625 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 RNF223E7ERA6 249 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 ANGPT2O15123 496 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 ENTPD5O75356 428 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 IGHV4-39P01824 125 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 CRYAAP02489 173 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 C1QCP02747 245 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 SLC25A16P16260 332 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 GPX2P18283 190 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 PCSK6P29122 969 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 ACVR1BP36896 505 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 RPS5P46782 204 aaKnown RBP9.86□□□□□ -0.83
ACTN4-209ENST00000586538 RGS8P57771 180 aaPredicted RBP9.86□□□□□ -0.83
ACTN4-209ENST00000586538 SNRPD2P62316 118 aaKnown RBP9.86□□□□□ -0.83
ACTN4-209ENST00000586538 IL1RL1Q01638 556 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 RBBP4Q09028 425 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 BNIP2Q12982 314 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 SCARB2Q14108 478 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 C9orf135Q5VTT2 229 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 ANKRD16Q6P6B7 361 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 HDXQ7Z353 690 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 ARMC8Q8IUR7 673 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 GPR137CQ8N3F9 429 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 ADPRHL1Q8NDY3 354 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 PIK3C3Q8NEB9 887 aa9.86□□□□□ -0.83
ACTN4-209ENST00000586538 NFKBIDQ8NI38 313 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms