RNA–Protein interactions for RNA: ENST00000585388.1

LSM12-202, Transcript of LSM12 homolog, humanhuman

TSL 3 BASIC

Gene LSM12, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-202ENST00000585388 UBE2NP61088 152 aaKnown RBP14.3□□□□□ -0.12
LSM12-202ENST00000585388 BNIP2Q12982 314 aa14.3□□□□□ -0.12
LSM12-202ENST00000585388 C1orf140Q5VVS0 124 aa14.3□□□□□ -0.12
LSM12-202ENST00000585388 OR1K1Q8NGR3 316 aa14.3□□□□□ -0.12
LSM12-202ENST00000585388 STK35Q8TDR2 534 aa14.3□□□□□ -0.12
LSM12-202ENST00000585388 SLC38A5Q8WUX1 472 aa14.3□□□□□ -0.12
LSM12-202ENST00000585388 TMEM158Q8WZ71 300 aa14.3□□□□□ -0.12
LSM12-202ENST00000585388 FBXO17Q96EF6 278 aa14.3□□□□□ -0.12
LSM12-202ENST00000585388 TMEM19Q96HH6 336 aa14.3□□□□□ -0.12
LSM12-202ENST00000585388 ITCHQ96J02 903 aa14.3□□□□□ -0.12
LSM12-202ENST00000585388 MAELQ96JY0 434 aaKnown RBP14.3□□□□□ -0.12
LSM12-202ENST00000585388 ALKBH3Q96Q83 286 aaPredicted RBP14.3□□□□□ -0.12
LSM12-202ENST00000585388 SLC38A2Q96QD8 506 aa14.3□□□□□ -0.12
LSM12-202ENST00000585388 KCNK17Q96T54 332 aa14.3□□□□□ -0.12
LSM12-202ENST00000585388 KATNB1Q9BVA0 655 aa14.3□□□□□ -0.12
LSM12-202ENST00000585388 SPATA9Q9BWV2 254 aa14.3□□□□□ -0.12
LSM12-202ENST00000585388 TPT1P8Q9HAU6 139 aa14.3□□□□□ -0.12
LSM12-202ENST00000585388 SLC6A13Q9NSD5 602 aa14.3□□□□□ -0.12
LSM12-202ENST00000585388 ZIM2Q9NZV7 527 aa14.3□□□□□ -0.12
LSM12-202ENST00000585388 IFT52Q9Y366 437 aa14.3□□□□□ -0.12
LSM12-202ENST00000585388 ALPK2Q86TB3 2170 aa14.3□□□□□ -0.12
LSM12-202ENST00000585388 ARFGEF3Q5TH69 2177 aa14.29□□□□□ -0.12
LSM12-202ENST00000585388 IGHV1-18A0A0C4DH31 117 aa14.29□□□□□ -0.12
LSM12-202ENST00000585388 A0A0G2JPF8 293 aa14.29□□□□□ -0.12
LSM12-202ENST00000585388 TMEM229AB2RXF0 380 aa14.29□□□□□ -0.12
LSM12-202ENST00000585388 HNRNPCL2B2RXH8 293 aa14.29□□□□□ -0.12
LSM12-202ENST00000585388 HNRNPCL3B7ZW38 293 aa14.29□□□□□ -0.12
LSM12-202ENST00000585388 NDUFS8O00217 210 aa14.29□□□□□ -0.12
LSM12-202ENST00000585388 KLF11O14901 512 aa14.29□□□□□ -0.12
LSM12-202ENST00000585388 HNRNPCL1O60812 293 aaKnown RBP14.29□□□□□ -0.12
LSM12-202ENST00000585388 F12P00748 615 aaPredicted RBP14.29□□□□□ -0.12
LSM12-202ENST00000585388 HNRNPCL4P0DMR1 293 aa14.29□□□□□ -0.12
LSM12-202ENST00000585388 USF1P22415 310 aaPredicted RBP14.29□□□□□ -0.12
LSM12-202ENST00000585388 GTF2E2P29084 291 aaKnown RBP14.29□□□□□ -0.12
LSM12-202ENST00000585388 PDLIM4P50479 330 aa14.29□□□□□ -0.12
LSM12-202ENST00000585388 P2RY4P51582 365 aa14.29□□□□□ -0.12
LSM12-202ENST00000585388 SH3BGRP55822 239 aaPredicted RBP14.29□□□□□ -0.12
LSM12-202ENST00000585388 WDR4P57081 412 aaKnown RBP14.29□□□□□ -0.12
LSM12-202ENST00000585388 TBRG1Q3YBR2 411 aa14.29□□□□□ -0.12
LSM12-202ENST00000585388 RPS26P11Q5JNZ5 115 aaPredicted RBP14.29□□□□□ -0.12
LSM12-202ENST00000585388 C6orf10Q5SRN2 563 aa14.29□□□□□ -0.12
LSM12-202ENST00000585388 CYB5R2Q6BCY4 276 aa14.29□□□□□ -0.12
LSM12-202ENST00000585388 CREB3L2Q70SY1 520 aa14.29□□□□□ -0.12
LSM12-202ENST00000585388 LSRQ86X29 649 aaPredicted RBP14.29□□□□□ -0.12
LSM12-202ENST00000585388 SLC35B4Q969S0 331 aa14.29□□□□□ -0.12
LSM12-202ENST00000585388 C3orf49Q96BT1 292 aa14.29□□□□□ -0.12
LSM12-202ENST00000585388 SDR39U1Q9NRG7 319 aaPredicted RBP14.29□□□□□ -0.12
LSM12-202ENST00000585388 RAB21Q9UL25 225 aa14.29□□□□□ -0.12
LSM12-202ENST00000585388 STAB1Q9NY15 2570 aa14.29□□□□□ -0.12
LSM12-202ENST00000585388 ARPC4-TTLL3A0A0A6YYG9 625 aa14.28□□□□□ -0.12
LSM12-202ENST00000585388 NPIPB7O75200 414 aa14.28□□□□□ -0.12
LSM12-202ENST00000585388 PDE5AO76074 875 aa14.28□□□□□ -0.12
LSM12-202ENST00000585388 LGI1O95970 557 aa14.28□□□□□ -0.12
LSM12-202ENST00000585388 PRG2P13727 222 aa14.28□□□□□ -0.12
LSM12-202ENST00000585388 ZNF16P17020 682 aaPredicted RBP14.28□□□□□ -0.12
LSM12-202ENST00000585388 GZMKP49863 264 aa14.28□□□□□ -0.12
LSM12-202ENST00000585388 SELENOPP49908 381 aa14.28□□□□□ -0.12
LSM12-202ENST00000585388 SWI5Q1ZZU3 235 aa14.28□□□□□ -0.12
LSM12-202ENST00000585388 C3orf36Q3SXR2 165 aa14.28□□□□□ -0.12
LSM12-202ENST00000585388 NIPAL3Q6P499 406 aa14.28□□□□□ -0.12
LSM12-202ENST00000585388 SLC46A3Q7Z3Q1 461 aa14.28□□□□□ -0.12
LSM12-202ENST00000585388 SERPINA11Q86U17 422 aa14.28□□□□□ -0.12
LSM12-202ENST00000585388 MFSD8Q8NHS3 518 aa14.28□□□□□ -0.12
LSM12-202ENST00000585388 MAGEE2Q8TD90 523 aaPredicted RBP14.28□□□□□ -0.12
LSM12-202ENST00000585388 MGARPQ8TDB4 240 aa14.28□□□□□ -0.12
LSM12-202ENST00000585388 NANOS1Q8WY41 292 aaKnown RBP14.28□□□□□ -0.12
LSM12-202ENST00000585388 PIMREGQ9BSJ6 248 aa14.28□□□□□ -0.12
LSM12-202ENST00000585388 BEX2Q9BXY8 128 aa14.28□□□□□ -0.12
LSM12-202ENST00000585388 LINC00470Q9BZP3 86 aa14.28□□□□□ -0.12
LSM12-202ENST00000585388 RAD21L1Q9H4I0 556 aa14.28□□□□□ -0.12
LSM12-202ENST00000585388 MYOZ1Q9NP98 299 aaPredicted RBP14.28□□□□□ -0.12
LSM12-202ENST00000585388 CA10Q9NS85 328 aa14.28□□□□□ -0.12
LSM12-202ENST00000585388 RCE1Q9Y256 329 aa14.28□□□□□ -0.12
LSM12-202ENST00000585388 UBDO15205 165 aa14.27□□□□□ -0.13
LSM12-202ENST00000585388 IGHV4-31P0DP07 118 aa14.27□□□□□ -0.13
LSM12-202ENST00000585388 POLR2JP52435 117 aaKnown RBP14.27□□□□□ -0.13
LSM12-202ENST00000585388 LSM11P83369 360 aaKnown RBP eCLIP14.27□□□□□ -0.13
LSM12-202ENST00000585388 GTDC1Q4AE62 458 aa14.27□□□□□ -0.13
LSM12-202ENST00000585388 ZNF311Q5JNZ3 666 aa14.27□□□□□ -0.13
LSM12-202ENST00000585388 ANKRD16Q6P6B7 361 aa14.27□□□□□ -0.13
LSM12-202ENST00000585388 C5orf46Q6UWT4 87 aa14.27□□□□□ -0.13
LSM12-202ENST00000585388 PHC2Q8IXK0 858 aa14.27□□□□□ -0.13
LSM12-202ENST00000585388 MIER2Q8N344 545 aa14.27□□□□□ -0.13
LSM12-202ENST00000585388 CLIP4Q8N3C7 705 aa14.27□□□□□ -0.13
LSM12-202ENST00000585388 ANKK1Q8NFD2 765 aa14.27□□□□□ -0.13
LSM12-202ENST00000585388 BBS10Q8TAM1 723 aa14.27□□□□□ -0.13
LSM12-202ENST00000585388 BCL2L2Q92843 193 aaPredicted RBP14.27□□□□□ -0.13
LSM12-202ENST00000585388 SORCS2Q96PQ0 1159 aa14.27□□□□□ -0.13
LSM12-202ENST00000585388 SHARPINQ9H0F6 387 aa14.27□□□□□ -0.13
LSM12-202ENST00000585388 NKIRAS1Q9NYS0 192 aa14.27□□□□□ -0.13
LSM12-202ENST00000585388 CRNNQ9UBG3 495 aaPredicted RBP14.27□□□□□ -0.13
LSM12-202ENST00000585388 RPS6KB2Q9UBS0 482 aa14.27□□□□□ -0.13
LSM12-202ENST00000585388 FBXO9Q9UK97 447 aaPredicted RBP14.27□□□□□ -0.13
LSM12-202ENST00000585388 B9A039 149 aa14.26□□□□□ -0.13
LSM12-202ENST00000585388 FTCDNL1E5RQL4 147 aa14.26□□□□□ -0.13
LSM12-202ENST00000585388 PHF1O43189 567 aaPredicted RBP14.26□□□□□ -0.13
LSM12-202ENST00000585388 LY6HO94772 140 aa14.26□□□□□ -0.13
LSM12-202ENST00000585388 PNMTP11086 282 aa14.26□□□□□ -0.13
LSM12-202ENST00000585388 HOXB1P14653 301 aaPredicted RBP14.26□□□□□ -0.13
LSM12-202ENST00000585388 ZNF43P17038 809 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms