RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 B3GALT5Q9Y2C3 310 aa16.41■□□□□ 0.22
RFFL-211ENST00000584541 MAGED1Q9Y5V3 778 aaPredicted RBP16.41■□□□□ 0.22
RFFL-211ENST00000584541 BSNQ9UPA5 3926 aa16.41■□□□□ 0.22
RFFL-211ENST00000584541 SHANK1Q9Y566 2161 aa16.4■□□□□ 0.22
RFFL-211ENST00000584541 CLCA1A8K7I4 914 aa16.4■□□□□ 0.22
RFFL-211ENST00000584541 B8ZZF3 427 aa16.4■□□□□ 0.22
RFFL-211ENST00000584541 M0R082 166 aa16.4■□□□□ 0.22
RFFL-211ENST00000584541 PDLIM1O00151 329 aa16.4■□□□□ 0.22
RFFL-211ENST00000584541 CASQ2O14958 399 aaPredicted RBP16.4■□□□□ 0.22
RFFL-211ENST00000584541 SLC19A2O60779 497 aa16.4■□□□□ 0.22
RFFL-211ENST00000584541 AKR7A3O95154 331 aa16.4■□□□□ 0.22
RFFL-211ENST00000584541 HOXD4P09016 255 aaPredicted RBP16.4■□□□□ 0.22
RFFL-211ENST00000584541 ASAH2BP0C7U1 165 aa16.4■□□□□ 0.22
RFFL-211ENST00000584541 AGFG1P52594 562 aaKnown RBP16.4■□□□□ 0.22
RFFL-211ENST00000584541 CASP6P55212 293 aa16.4■□□□□ 0.22
RFFL-211ENST00000584541 COX10Q12887 443 aa16.4■□□□□ 0.22
RFFL-211ENST00000584541 ZNF239Q16600 458 aaKnown RBP16.4■□□□□ 0.22
RFFL-211ENST00000584541 FAHD1Q6P587 224 aa16.4■□□□□ 0.22
RFFL-211ENST00000584541 H1FNTQ75WM6 255 aaPredicted RBP16.4■□□□□ 0.22
RFFL-211ENST00000584541 P4HA3Q7Z4N8 544 aa16.4■□□□□ 0.22
RFFL-211ENST00000584541 EPHX4Q8IUS5 362 aa16.4■□□□□ 0.22
RFFL-211ENST00000584541 LRRC17Q8N6Y2 441 aa16.4■□□□□ 0.22
RFFL-211ENST00000584541 ZNF417Q8TAU3 575 aa16.4■□□□□ 0.22
RFFL-211ENST00000584541 ZNF587Q96SQ5 575 aaPredicted RBP16.4■□□□□ 0.22
RFFL-211ENST00000584541 UCK2Q9BZX2 261 aa16.4■□□□□ 0.22
RFFL-211ENST00000584541 C8orf4Q9NR00 106 aa16.4■□□□□ 0.22
RFFL-211ENST00000584541 ZNF835Q9Y2P0 537 aa16.4■□□□□ 0.22
RFFL-211ENST00000584541 ORC6Q9Y5N6 252 aa16.4■□□□□ 0.22
RFFL-211ENST00000584541 ZGRF1Q86YA3 2104 aa16.4■□□□□ 0.22
RFFL-211ENST00000584541 ARHGAP21Q5T5U3 1957 aa16.4■□□□□ 0.22
RFFL-211ENST00000584541 BLOC1S5-TXNDC5H3BN57 136 aa16.39■□□□□ 0.21
RFFL-211ENST00000584541 CDC42EP2O14613 210 aa16.39■□□□□ 0.21
RFFL-211ENST00000584541 KLF4O43474 513 aa16.39■□□□□ 0.21
RFFL-211ENST00000584541 FZD7O75084 574 aa16.39■□□□□ 0.21
RFFL-211ENST00000584541 FCGR2AP12318 317 aa16.39■□□□□ 0.21
RFFL-211ENST00000584541 IL1RL1Q01638 556 aa16.39■□□□□ 0.21
RFFL-211ENST00000584541 DAG1Q14118 895 aa16.39■□□□□ 0.21
RFFL-211ENST00000584541 PON3Q15166 354 aa16.39■□□□□ 0.21
RFFL-211ENST00000584541 ZBED5Q49AG3 693 aa16.39■□□□□ 0.21
RFFL-211ENST00000584541 TMEM225Q6GV28 225 aa16.39■□□□□ 0.21
RFFL-211ENST00000584541 RPL13AP3Q6NVV1 102 aa16.39■□□□□ 0.21
RFFL-211ENST00000584541 CBR4Q8N4T8 237 aa16.39■□□□□ 0.21
RFFL-211ENST00000584541 ADPRHL1Q8NDY3 354 aa16.39■□□□□ 0.21
RFFL-211ENST00000584541 OR13C2Q8NGS9 318 aa16.39■□□□□ 0.21
RFFL-211ENST00000584541 MAGEE2Q8TD90 523 aaPredicted RBP16.39■□□□□ 0.21
RFFL-211ENST00000584541 TRIB1Q96RU8 372 aa16.39■□□□□ 0.21
RFFL-211ENST00000584541 NIPSNAP1Q9BPW8 284 aa16.39■□□□□ 0.21
RFFL-211ENST00000584541 VCXQ9H320 206 aa16.39■□□□□ 0.21
RFFL-211ENST00000584541 TP63Q9H3D4 680 aaPredicted RBP16.39■□□□□ 0.21
RFFL-211ENST00000584541 SMURF2Q9HAU4 748 aa16.39■□□□□ 0.21
RFFL-211ENST00000584541 PAPOLBQ9NRJ5 636 aaKnown RBP16.39■□□□□ 0.21
RFFL-211ENST00000584541 KRT84Q9NSB2 600 aa16.39■□□□□ 0.21
RFFL-211ENST00000584541 ENOPH1Q9UHY7 261 aa16.39■□□□□ 0.21
RFFL-211ENST00000584541 POFUT2Q9Y2G5 429 aa16.39■□□□□ 0.21
RFFL-211ENST00000584541 ZNF175Q9Y473 711 aa16.39■□□□□ 0.21
RFFL-211ENST00000584541 NBEAQ8NFP9 2946 aa16.39■□□□□ 0.21
RFFL-211ENST00000584541 TRAV27A0A087WT01 109 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 SLC22A20A6NK97 555 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 AQP7P3A6NL99 342 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 EI24O14681 340 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 VAMP5O95183 116 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 RCBTB2O95199 551 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 ADORA3P0DMS8 318 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 IGFBP5P24593 272 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 PEX2P28328 305 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 DAPP51397 102 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 ALDH3A2P51648 485 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 PRPS1P60891 318 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 H3F3AP84243 136 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 LRRC36Q1X8D7 754 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 ACSF3Q4G176 576 aaPredicted RBP16.38■□□□□ 0.21
RFFL-211ENST00000584541 LPCAT4Q643R3 524 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 GTF2IRD2BQ6EKJ0 949 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 CD300LDQ6UXZ3 194 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 Q6ZPB1 254 aaPredicted RBP16.38■□□□□ 0.21
RFFL-211ENST00000584541 RASSF6Q6ZTQ3 369 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 FCRLAQ7L513 359 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 GTF2IRD2Q86UP8 949 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 SLC43A2Q8N370 569 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 TMEM99Q8N816 258 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 OR51A7Q8NH64 312 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 GPA33Q99795 319 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 VCX3BQ9H321 246 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 CALHM2Q9HA72 323 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 USE1Q9NZ43 259 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 RASD1Q9Y272 281 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 HIF3AQ9Y2N7 669 aa16.38■□□□□ 0.21
RFFL-211ENST00000584541 FASNP49327 2511 aaKnown RBP16.38■□□□□ 0.21
RFFL-211ENST00000584541 COL6A6A6NMZ7 2263 aa16.37■□□□□ 0.21
RFFL-211ENST00000584541 IGHV3-15A0A0B4J1V0 119 aa16.37■□□□□ 0.21
RFFL-211ENST00000584541 PLPP3O14495 311 aa16.37■□□□□ 0.21
RFFL-211ENST00000584541 SOCS2O14508 198 aa16.37■□□□□ 0.21
RFFL-211ENST00000584541 SMAD9O15198 467 aaKnown RBP16.37■□□□□ 0.21
RFFL-211ENST00000584541 HPRP00739 348 aa16.37■□□□□ 0.21
RFFL-211ENST00000584541 PRB1P04280 392 aa16.37■□□□□ 0.21
RFFL-211ENST00000584541 CDH2P19022 906 aaPredicted RBP16.37■□□□□ 0.21
RFFL-211ENST00000584541 AHCYP23526 432 aa16.37■□□□□ 0.21
RFFL-211ENST00000584541 ACVR2AP27037 513 aa16.37■□□□□ 0.21
RFFL-211ENST00000584541 PPP2R2BQ00005 443 aa16.37■□□□□ 0.21
RFFL-211ENST00000584541 TLE1Q04724 770 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms