RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 AP3D1O14617 1153 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 PIP5K1BO14986 540 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 PPIHO43447 177 aaKnown RBP10.96□□□□□ -0.65
SS18-219ENST00000581570 SCN2BO60939 215 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 PEX11AO75192 247 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 LYPLA1O75608 230 aaPredicted RBP10.96□□□□□ -0.65
SS18-219ENST00000581570 GUSBP08236 651 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 OR12D1P0DN82 309 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 ANPEPP15144 967 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 ARR3P36575 388 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 EVX1P49640 407 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 MAP2K6P52564 334 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 SH3BGRP55822 239 aaPredicted RBP10.96□□□□□ -0.65
SS18-219ENST00000581570 ETF1P62495 437 aaKnown RBP10.96□□□□□ -0.65
SS18-219ENST00000581570 UBA52P62987 128 aaKnown RBP10.96□□□□□ -0.65
SS18-219ENST00000581570 NPRL3Q12980 569 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 PTGR1Q14914 329 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 ATAD3BQ5T9A4 648 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 KRT80Q6KB66 452 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 NIPAL3Q6P499 406 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 CREB3L2Q70SY1 520 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 C1QL2Q7Z5L3 287 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 BPIFB2Q8N4F0 458 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 KRTCAP2Q8N6L1 136 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 CCDC63Q8NA47 563 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 XAGE5Q8WWM1 108 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 CNOT9Q92600 299 aaKnown RBP10.96□□□□□ -0.65
SS18-219ENST00000581570 DUSP26Q9BV47 211 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 OR51I1Q9H343 314 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 NOX3Q9HBY0 568 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 CRLF2Q9HC73 371 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 G6PC2Q9NQR9 355 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 POLE3Q9NRF9 147 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 ZNF275Q9NSD4 429 aaPredicted RBP10.96□□□□□ -0.65
SS18-219ENST00000581570 DDX28Q9NUL7 540 aaKnown RBP10.96□□□□□ -0.65
SS18-219ENST00000581570 GIMAP2Q9UG22 337 aa10.96□□□□□ -0.65
SS18-219ENST00000581570 RNF103-CHMP3A0A140T963 221 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 TMEM229AB2RXF0 380 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 PLIN3O60664 434 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 AGR2O95994 175 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 ABHD2P08910 425 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 ARAFP10398 606 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 CPA3P15088 417 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 ARF1P84077 181 aaKnown RBP10.95□□□□□ -0.66
SS18-219ENST00000581570 ROR2Q01974 943 aaKnown RBP10.95□□□□□ -0.66
SS18-219ENST00000581570 PLAURQ03405 335 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 CCDC153Q494R4 210 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 KANK2Q63ZY3 851 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 REP15Q6BDI9 236 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 ACSM5Q6NUN0 579 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 FRRS1Q6ZNA5 592 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 RIBC1Q8N443 379 aaPredicted RBP10.95□□□□□ -0.66
SS18-219ENST00000581570 ANKK1Q8NFD2 765 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 NANPQ8TBE9 248 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 TWIST2Q8WVJ9 160 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 YIPF5Q969M3 257 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 ROPN1LQ96C74 230 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 PPP3R2Q96LZ3 170 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 TAPBPLQ9BX59 468 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 TMPRSS13Q9BYE2 586 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 MRPL37Q9BZE1 423 aaKnown RBP10.95□□□□□ -0.66
SS18-219ENST00000581570 LINC00470Q9BZP3 86 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 TBK1Q9UHD2 729 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 PYCARDQ9ULZ3 195 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 PPIAL4AQ9Y536 164 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 TGP01266 2768 aa10.95□□□□□ -0.66
SS18-219ENST00000581570 A0A1W2PPM1 405 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 VAMP5O95183 116 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 MPZL1O95297 269 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 ADRA2CP18825 462 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 PRPS1L1P21108 318 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 NR4A1P22736 598 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 CXCR1P25024 350 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 ECHS1P30084 290 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 ALDH3B1P43353 468 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 P2RY4P51582 365 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 SEC24CP53992 1094 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 MSMPQ1L6U9 139 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 PGS1Q32NB8 556 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 IL23RQ5VWK5 629 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 TNFAIP8L2Q6P589 184 aaPredicted RBP10.94□□□□□ -0.66
SS18-219ENST00000581570 MDP1Q86V88 176 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 EPHX4Q8IUS5 362 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 HOMEZQ8IX15 550 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 CLECL1Q8IZS7 167 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 MIPOL1Q8TD10 442 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 MZB1Q8WU39 189 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 RAB8BQ92930 207 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 C1orf50Q9BV19 199 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 ZNF416Q9BWM5 594 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 GATA5Q9BWX5 397 aaPredicted RBP10.94□□□□□ -0.66
SS18-219ENST00000581570 NTN4Q9HB63 628 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 ADPRHL2Q9NX46 363 aa10.94□□□□□ -0.66
SS18-219ENST00000581570 PSMC3IPQ9P2W1 217 aaPredicted RBP10.94□□□□□ -0.66
SS18-219ENST00000581570 A0A0G2JMP0 313 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 A0A0X1KG70 313 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 ZNF503-AS2A6NEH8 195 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 TMEM233B4DJY2 109 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 RPL36A-HNRNPH2H7BZ11 118 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 FAAHO00519 579 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms