RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 EMC9Q9Y3B6 208 aa12.13□□□□□ -0.47
NDE1-209ENST00000574109 LRRK2Q5S007 2527 aa12.13□□□□□ -0.47
NDE1-209ENST00000574109 SPTBN1Q01082 2364 aaKnown RBP12.13□□□□□ -0.47
NDE1-209ENST00000574109 IGKV3D-15A0A087WSY6 115 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 A0A087WUU8 490 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 SH3PXD2BA1X283 911 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 KPNA4O00629 521 aaPredicted RBP12.12□□□□□ -0.47
NDE1-209ENST00000574109 SS18L1O75177 396 aaPredicted RBP12.12□□□□□ -0.47
NDE1-209ENST00000574109 E2F6O75461 281 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 OR7A10O76100 309 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 LDLRP01130 860 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 OPN1LWP04000 364 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 HIST1H2ABP04908 130 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 GLI4P10075 376 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 CEACAM8P31997 349 aaPredicted RBP12.12□□□□□ -0.47
NDE1-209ENST00000574109 LIMS1P48059 325 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 PRKCDQ05655 676 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 ATP6AP1Q15904 470 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 PODNL1Q6PEZ8 512 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 H1FNTQ75WM6 255 aaPredicted RBP12.12□□□□□ -0.47
NDE1-209ENST00000574109 HIST3H2AQ7L7L0 130 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 HDDC2Q7Z4H3 204 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 FJX1Q86VR8 437 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 NRMQ8IXM6 262 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 OR4K5Q8NGD3 323 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 OR5J2Q8NH18 312 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 DNAJC9Q8WXX5 260 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 HIST1H2ACQ93077 130 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 TAAR8Q969N4 342 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 NRBF2Q96F24 287 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 FUZQ9BT04 418 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 DENND2DQ9H6A0 471 aaPredicted RBP12.12□□□□□ -0.47
NDE1-209ENST00000574109 BCO1Q9HAY6 547 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 FANCFQ9NPI8 374 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 MEPEQ9NQ76 525 aaPredicted RBP12.12□□□□□ -0.47
NDE1-209ENST00000574109 KLHL13Q9P2N7 655 aa12.12□□□□□ -0.47
NDE1-209ENST00000574109 USP9XQ93008 2570 aaPredicted RBP12.12□□□□□ -0.47
NDE1-209ENST00000574109 TRBV4-1A0A0J9YWV2 114 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 LOC102725191A0A1B0GVB3 256 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 ZNF724A8MTY0 619 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 M0R082 166 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 DVL2O14641 736 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 CLOCKO15516 846 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 ZNHIT1O43257 154 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 LRRTM2O43300 516 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 OR10H3O60404 316 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 CCNB2O95067 398 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 ASAH2BP0C7U1 165 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 TMIGD3P0DMS9 266 aaPredicted RBP12.11□□□□□ -0.47
NDE1-209ENST00000574109 SAGP10523 405 aaPredicted RBP12.11□□□□□ -0.47
NDE1-209ENST00000574109 IFI30P13284 250 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 GRPRP30550 384 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 CHRNB4P30926 498 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 DNAJA1P31689 397 aaKnown RBP12.11□□□□□ -0.47
NDE1-209ENST00000574109 OPRM1P35372 400 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 PUDPQ08623 228 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 RASGEF1BQ0VAM2 473 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 RPL13AP3Q6NVV1 102 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 C3P1Q6ZMU1 363 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 TMPRSS11FQ6ZWK6 438 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 SLC46A3Q7Z3Q1 461 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 C9orf106Q8NAJ2 232 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 OR6K3Q8NGY3 331 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 OR52J3Q8NH60 311 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 PFN4Q8NHR9 129 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 ZNF417Q8TAU3 575 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 SLCO4A1Q96BD0 722 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 SLC25A36Q96CQ1 311 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 CCDC120Q96HB5 630 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 ZNF587Q96SQ5 575 aaPredicted RBP12.11□□□□□ -0.47
NDE1-209ENST00000574109 PSD2Q9BQI7 771 aa12.11□□□□□ -0.47
NDE1-209ENST00000574109 ZNF629Q9UEG4 869 aaPredicted RBP12.11□□□□□ -0.47
NDE1-209ENST00000574109 NPIPB13A6NJU9 1138 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 EFCAB9A8MZ26 197 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 NPIPB4C9JG80 1138 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 AQP8O94778 261 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 AKR7A3O95154 331 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 OR6A2O95222 327 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 TGM6O95932 706 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 CH25HO95992 272 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 FPR3P25089 353 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 CTSSP25774 331 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 PRPS1P60891 318 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 RPS4XP62701 263 aaKnown RBP12.1□□□□□ -0.47
NDE1-209ENST00000574109 PMPCAQ10713 525 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 PMS2P3Q13401 168 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 GUSBP1Q15486 140 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 EXOC3L2Q2M3D2 409 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 SLC25A35Q3KQZ1 300 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 TMEM201Q5SNT2 666 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 TMEM225Q6GV28 225 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 XKRXQ6PP77 449 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 SEM1Q6ZVN7 128 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 FAM214BQ7L5A3 538 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 SVOPLQ8N434 492 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 MARVELD2Q8N4S9 558 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 ZNF808Q8N4W9 903 aaPredicted RBP12.1□□□□□ -0.47
NDE1-209ENST00000574109 ANKK1Q8NFD2 765 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 OR4C15Q8NGM1 316 aa12.1□□□□□ -0.47
NDE1-209ENST00000574109 ABHD3Q8WU67 409 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms