RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 STPG2Q8N412 459 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 RIBC1Q8N443 379 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 GBGT1Q8N5D6 347 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 LFNGQ8NES3 379 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 OR2AK2Q8NG84 335 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 OR1B1Q8NGR6 318 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 OR5R1Q8NH85 324 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 ACER1Q8TDN7 264 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 NEK7Q8TDX7 302 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 BAALCQ8WXS3 180 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 ART4Q93070 314 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 FAF2Q96CS3 445 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 DGCR14Q96DF8 476 aaKnown RBP4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 SGTBQ96EQ0 304 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 RMND5BQ96G75 393 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 SDSLQ96GA7 329 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 STACQ99469 402 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 TEAD3Q99594 435 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 KLHDC3Q9BQ90 382 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 COPS4Q9BT78 406 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 BEX2Q9BXY8 128 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 FAM107BQ9H098 131 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 NEUROG2Q9H2A3 272 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 EBF3Q9H4W6 596 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 NHEJ1Q9H9Q4 299 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 FGFR1OP2Q9NVK5 253 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 PAK1IP1Q9NWT1 392 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 VAPAQ9P0L0 249 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 FBXL3Q9UKT7 428 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 GUCA1BQ9UMX6 200 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 AK6Q9Y3D8 172 aaKnown RBP4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 STYXL1Q9Y6J8 313 aa4.42□□□□□ -1.7
TOPBP1-210ENST00000572787 ARID1BQ8NFD5 2236 aaPredicted RBP4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 C9J4A7 227 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 PROB1E7EW31 1015 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 H0Y980 276 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 H3BNX3 289 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 TMEM178BH3BS89 294 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 M0QZ92 97 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 KMOO15229 486 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 MAGEB4O15481 346 aaPredicted RBP4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 EIF4E2O60573 245 aaKnown RBP4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 TIMP1P01033 207 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 IGHG4P01861 327 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 ORM1P02763 201 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 CDK1P06493 297 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 CHRM5P08912 532 aaPredicted RBP4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 HBQ1P09105 142 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 THRAP10827 490 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 ABOP16442 354 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 SERPINB1P30740 379 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 OPRD1P41143 372 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 DAP3P51398 398 aaKnown RBP4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 UGT2B15P54855 530 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 RAG2P55895 527 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 CLDN6P56747 220 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 SEC61BP60468 96 aaKnown RBP4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 ZP1P60852 638 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 RPS18P62269 152 aaKnown RBP4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 LSM6P62312 80 aaKnown RBP4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 TAF10Q12962 218 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 TRAF3Q13114 568 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 VGLL4Q14135 290 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 PON3Q15166 354 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 NDUFA5Q16718 116 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 RFX4Q33E94 735 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 LRRC37A5PQ49AS3 106 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 TIMM23BQ5SRD1 257 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 SYPL2Q5VXT5 272 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 PRR5LQ6MZQ0 368 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 ZNF530Q6P9A1 599 aaPredicted RBP4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 BTNL3Q6UXE8 466 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 APTXQ7Z2E3 356 aaKnown RBP4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 APOBEC3FQ8IUX4 373 aaKnown RBP4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 NAXDQ8IW45 347 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 C2orf73Q8N5S3 287 aaPredicted RBP4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 KLHDC1Q8N7A1 406 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 OR2L5Q8NG80 312 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 OR5L2Q8NGL0 311 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 OR6K6Q8NGW6 343 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 OR2V1Q8NHB1 315 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 CNIH3Q8TBE1 160 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 SPPL2AQ8TCT8 520 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 CD99L2Q8TCZ2 262 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 MAGEC3Q8TD91 643 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 GPR148Q8TDV2 347 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 CXorf40AQ8TE69 158 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 AENQ8WTP8 325 aaKnown RBP4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 MZB1Q8WU39 189 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 NELFBQ8WX92 580 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 IFT81Q8WYA0 676 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 PIK3R3Q92569 461 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 RND1Q92730 232 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 EME1Q96AY2 570 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 MBD6Q96DN6 1003 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 ZBED6CLQ96FA7 236 aaPredicted RBP4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 GFM1Q96RP9 751 aaKnown RBP4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 TRIM51Q9BSJ1 452 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 URM1Q9BTM9 101 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms