RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 TSPYL5Q86VY4 417 aaPredicted RBP6.86□□□□□ -1.31
CDH3-209ENST00000569080 EPHX4Q8IUS5 362 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 P3H2Q8IVL5 708 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 UBE2J2Q8N2K1 259 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 HIPK4Q8NE63 616 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 GPR32P1Q8NGA4 272 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 OR52N5Q8NH56 324 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 MFSD8Q8NHS3 518 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 TSPEARQ8WU66 669 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 SMAP2Q8WU79 429 aaPredicted RBP6.86□□□□□ -1.31
CDH3-209ENST00000569080 ANKRD27Q96NW4 1050 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 ALKBH3Q96Q83 286 aaPredicted RBP6.86□□□□□ -1.31
CDH3-209ENST00000569080 CGREF1Q99674 301 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 SIKE1Q9BRV8 207 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 TRAF4Q9BUZ4 470 aaPredicted RBP6.86□□□□□ -1.31
CDH3-209ENST00000569080 PRR14Q9BWN1 585 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 GRIP2Q9C0E4 1043 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 SLCO5A1Q9H2Y9 848 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 NELFAQ9H3P2 528 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 RABEP2Q9H5N1 569 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 CXorf56Q9H5V9 222 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 ARMC7Q9H6L4 198 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 KAT8Q9H7Z6 458 aaKnown RBP6.86□□□□□ -1.31
CDH3-209ENST00000569080 NGBQ9NPG2 151 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 SLC17A5Q9NRA2 495 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 ADPRHL2Q9NX46 363 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 KLHL14Q9P2G3 628 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.86□□□□□ -1.31
CDH3-209ENST00000569080 TESQ9UGI8 421 aaKnown RBP6.86□□□□□ -1.31
CDH3-209ENST00000569080 LEF1Q9UJU2 399 aaPredicted RBP6.86□□□□□ -1.31
CDH3-209ENST00000569080 ZNF232Q9UNY5 417 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 CORO2BQ9UQ03 480 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 LAMP3Q9UQV4 416 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 CUBNO60494 3623 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 CR1P17927 2039 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 A0A087WUJ7 227 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 A0A0G2JND7 137 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 CCT8L1PA6NM43 557 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 E7EQL1 145 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 M0R082 166 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 TRAF3IP2O43734 574 aaPredicted RBP6.85□□□□□ -1.31
CDH3-209ENST00000569080 VAMP5O95183 116 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 LYPD3O95274 346 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 IGHV4-39P01824 125 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 HEXAP06865 529 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 CD247P20963 164 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 SLC6A2P23975 617 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 CD40P25942 277 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 MPGP29372 298 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 PCGF2P35227 344 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 RPS5P46782 204 aaKnown RBP6.85□□□□□ -1.31
CDH3-209ENST00000569080 ZNF83P51522 516 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 CDH11P55287 796 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 ATP5J2P56134 94 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 RBBP4Q09028 425 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 NPTX1Q15818 432 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 NRF1Q16656 503 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 ALG10BQ5I7T1 473 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 FAM69AQ5T7M9 428 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 C9orf135Q5VTT2 229 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 METTL21CQ5VZV1 264 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 FAM91A1Q658Y4 838 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 OR7E24Q6IFN5 339 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 NHLRC1Q6VVB1 395 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 AAED1Q7RTV5 226 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 GPAT4Q86UL3 456 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 KRT73Q86Y46 540 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 WDFY1Q8IWB7 410 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 POMGNT2Q8NAT1 580 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 ADPRHL1Q8NDY3 354 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 OR4D11Q8NGI4 311 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 ZNF417Q8TAU3 575 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 SLC38A4Q969I6 547 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 TAAR8Q969N4 342 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 MUCL1Q96DR8 90 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 SLC41A3Q96GZ6 507 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 ZNF587Q96SQ5 575 aaPredicted RBP6.85□□□□□ -1.31
CDH3-209ENST00000569080 ARHGDIGQ99819 225 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 SPATA5L1Q9BVQ7 753 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 TAPBPLQ9BX59 468 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 TMEM120AQ9BXJ8 343 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 LINC00470Q9BZP3 86 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 CACYBPQ9HB71 228 aaKnown RBP6.85□□□□□ -1.31
CDH3-209ENST00000569080 PARPBPQ9NWS1 579 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 TRIM33Q9UPN9 1127 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 RCE1Q9Y256 329 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 ANGPT4Q9Y264 503 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 RASD1Q9Y272 281 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 NDUFAF1Q9Y375 327 aa6.85□□□□□ -1.31
CDH3-209ENST00000569080 TRAV36DV7A0A075B6V5 113 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 LOC102725191A0A1B0GVB3 256 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 CIB4A0PJX0 185 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 PRORSD1PA6NEY8 169 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 ELOA3DA6NLF2 546 aaPredicted RBP6.84□□□□□ -1.31
CDH3-209ENST00000569080 EVPLLA8MZ36 301 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 M0R3H8 397 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 ANGPT2O15123 496 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 FMO6PO60774 539 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 NDUFS7O75251 213 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 UPK3AO75631 287 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms