RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 CKMT1AP12532 417 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 ACP5P13686 325 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 F3P13726 295 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 POU2F1P14859 743 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 ALOX12P18054 663 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 TNFRSF1BP20333 461 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 ATP5A1P25705 553 aaKnown RBP4.84□□□□□ -1.63
CAPN3-217ENST00000567817 FGF9P31371 208 aaPredicted RBP4.84□□□□□ -1.63
CAPN3-217ENST00000567817 GABRA5P31644 462 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 DRD3P35462 400 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 OPRD1P41143 372 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 RPS5P46782 204 aaKnown RBP4.84□□□□□ -1.63
CAPN3-217ENST00000567817 GSSP48637 474 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 SLC9A3P48764 834 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 NUDT6P53370 316 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 WNT4P56705 351 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 SKP1P63208 163 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 CDK5Q00535 292 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 E2F1Q01094 437 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 BDH1Q02338 343 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 SLAMF1Q13291 335 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 TPBGQ13641 420 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 GALEQ14376 348 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 GINS1Q14691 196 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 KIR2DS3Q14952 304 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 IRF4Q15306 451 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 TRAM1Q15629 374 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 MAPK11Q15759 364 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 SNAPC1Q16533 368 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 DECR1Q16698 335 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 KRTAP21-3Q3LHN1 58 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 SYT14P1Q58G82 188 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 DDI2Q5TDH0 399 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 TMEM236Q5W0B7 351 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 ZNF425Q6IV72 752 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 HEPHL1Q6MZM0 1159 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 PODNL1Q6PEZ8 512 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 C16orf62Q7Z3J2 963 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 ASPGQ86U10 573 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 GID4Q8IVV7 300 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 PEX5LQ8IYB4 626 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 SIRT6Q8N6T7 355 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 ZNF366Q8N895 744 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 ACOT4Q8N9L9 421 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 LMNTD1Q8N9Z9 388 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 LINC01555Q8NAE3 123 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 CAMKVQ8NCB2 501 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 MORN4Q8NDC4 146 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 C7orf57Q8NEG2 295 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 OR52E1Q8NGJ3 308 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 OR52N1Q8NH53 320 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 VANGL1Q8TAA9 524 aaPredicted RBP4.84□□□□□ -1.63
CAPN3-217ENST00000567817 TMEM163Q8TC26 289 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 NT5CQ8TCD5 201 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 ADAMTS15Q8TE58 950 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 OIT3Q8WWZ8 545 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 ACOT12Q8WYK0 555 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 RSC1A1Q92681 617 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 RPL3LQ92901 407 aaKnown RBP4.84□□□□□ -1.63
CAPN3-217ENST00000567817 RAB8BQ92930 207 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 SLC35B4Q969S0 331 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 SLC25A46Q96AG3 418 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 LRR1Q96L50 414 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 KCTD7Q96MP8 289 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 LRFN5Q96NI6 719 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 OPALINQ96PE5 141 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 SNX18Q96RF0 628 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 IL4I1Q96RQ9 567 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 PRR25Q96S07 402 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 SERINC2Q96SA4 455 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 MACROD1Q9BQ69 325 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 C17orf62Q9BQA9 187 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 RHNO1Q9BSD3 238 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 CENPOQ9BU64 300 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 TSSK6Q9BXA6 273 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 OR51E2Q9H255 320 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 KCNN2Q9H2S1 579 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 FN3KQ9H479 309 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 MTHFD2LQ9H903 347 aaPredicted RBP4.84□□□□□ -1.63
CAPN3-217ENST00000567817 ANKRA2Q9H9E1 313 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 AMBNQ9NP70 447 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 TRIM36Q9NQ86 728 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 POLE3Q9NRF9 147 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 ABCB10Q9NRK6 738 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 IMP3Q9NV31 184 aaKnown RBP4.84□□□□□ -1.63
CAPN3-217ENST00000567817 TEX10Q9NXF1 929 aaPredicted RBP4.84□□□□□ -1.63
CAPN3-217ENST00000567817 TVP23BQ9NYZ1 205 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 AASSQ9UDR5 926 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 SLC23A2Q9UGH3 650 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 SATB2Q9UPW6 733 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 BAIAP2Q9UQB8 552 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 TMEM5Q9Y2B1 443 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 TMEM98Q9Y2Y6 226 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 ASB4Q9Y574 426 aa4.84□□□□□ -1.63
CAPN3-217ENST00000567817 FLNCQ14315 2725 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 A0A087WV62 115 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 TRDV1A0A1B0GX56 115 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 FEZF1A0PJY2 475 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 HTR3EA5X5Y0 456 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 DNAJC9-AS1A6NH13 148 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms