RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 AAED1Q7RTV5 226 aa17.53■□□□□ 0.4
CMTM3-211ENST00000565922 ZNF433Q8N7K0 673 aaPredicted RBP17.53■□□□□ 0.4
CMTM3-211ENST00000565922 POMGNT2Q8NAT1 580 aa17.53■□□□□ 0.4
CMTM3-211ENST00000565922 PROX1Q92786 737 aa17.53■□□□□ 0.4
CMTM3-211ENST00000565922 PIGTQ969N2 578 aa17.53■□□□□ 0.4
CMTM3-211ENST00000565922 TAMM41Q96BW9 452 aa17.53■□□□□ 0.4
CMTM3-211ENST00000565922 RCN3Q96D15 328 aa17.53■□□□□ 0.4
CMTM3-211ENST00000565922 KTI12Q96EK9 354 aaPredicted RBP17.53■□□□□ 0.4
CMTM3-211ENST00000565922 HS3ST6Q96QI5 342 aa17.53■□□□□ 0.4
CMTM3-211ENST00000565922 UBTD1Q9HAC8 227 aa17.53■□□□□ 0.4
CMTM3-211ENST00000565922 BAG5Q9UL15 447 aa17.53■□□□□ 0.4
CMTM3-211ENST00000565922 B3GALT5Q9Y2C3 310 aa17.53■□□□□ 0.4
CMTM3-211ENST00000565922 PRRC2AP48634 2157 aaKnown RBP17.52■□□□□ 0.4
CMTM3-211ENST00000565922 OR5H1A6NKK0 313 aa17.52■□□□□ 0.4
CMTM3-211ENST00000565922 CCT8L1PA6NM43 557 aa17.52■□□□□ 0.4
CMTM3-211ENST00000565922 CHP2O43745 196 aa17.52■□□□□ 0.4
CMTM3-211ENST00000565922 COX4I1P13073 169 aa17.52■□□□□ 0.4
CMTM3-211ENST00000565922 CD247P20963 164 aa17.52■□□□□ 0.4
CMTM3-211ENST00000565922 LOXP28300 417 aaPredicted RBP17.52■□□□□ 0.4
CMTM3-211ENST00000565922 P2RY4P51582 365 aa17.52■□□□□ 0.4
CMTM3-211ENST00000565922 PPA1Q15181 289 aa17.52■□□□□ 0.4
CMTM3-211ENST00000565922 ACKR1Q16570 336 aa17.52■□□□□ 0.4
CMTM3-211ENST00000565922 DEFB113Q30KQ7 82 aa17.52■□□□□ 0.4
CMTM3-211ENST00000565922 C1QTNF12Q5T7M4 302 aa17.52■□□□□ 0.4
CMTM3-211ENST00000565922 ZNF704Q6ZNC4 412 aaPredicted RBP17.52■□□□□ 0.4
CMTM3-211ENST00000565922 POU5F2Q8N7G0 328 aa17.52■□□□□ 0.4
CMTM3-211ENST00000565922 C1orf162Q8NEQ5 155 aaPredicted RBP17.52■□□□□ 0.4
CMTM3-211ENST00000565922 OR2T12Q8NG77 320 aa17.52■□□□□ 0.4
CMTM3-211ENST00000565922 GPR32P1Q8NGA4 272 aa17.52■□□□□ 0.4
CMTM3-211ENST00000565922 OR6T1Q8NGN1 323 aa17.52■□□□□ 0.4
CMTM3-211ENST00000565922 ELAC2Q9BQ52 826 aaKnown RBP17.52■□□□□ 0.4
CMTM3-211ENST00000565922 TMEM43Q9BTV4 400 aa17.52■□□□□ 0.4
CMTM3-211ENST00000565922 PRR14Q9BWN1 585 aa17.52■□□□□ 0.4
CMTM3-211ENST00000565922 SLCO5A1Q9H2Y9 848 aa17.52■□□□□ 0.4
CMTM3-211ENST00000565922 BEX4Q9NWD9 120 aaPredicted RBP17.52■□□□□ 0.4
CMTM3-211ENST00000565922 CORINQ9Y5Q5 1042 aa17.52■□□□□ 0.4
CMTM3-211ENST00000565922 IGKV1D-42A0A075B6H8 117 aa17.51■□□□□ 0.39
CMTM3-211ENST00000565922 NDUFAB1O14561 156 aa17.51■□□□□ 0.39
CMTM3-211ENST00000565922 AKAP8O43823 692 aaKnown RBP17.51■□□□□ 0.39
CMTM3-211ENST00000565922 TPST2O60704 377 aa17.51■□□□□ 0.39
CMTM3-211ENST00000565922 RAD51DO75771 328 aa17.51■□□□□ 0.39
CMTM3-211ENST00000565922 ZNF43P17038 809 aa17.51■□□□□ 0.39
CMTM3-211ENST00000565922 NTF4P34130 210 aa17.51■□□□□ 0.39
CMTM3-211ENST00000565922 CDH12P55289 794 aa17.51■□□□□ 0.39
CMTM3-211ENST00000565922 ENTPD8Q5MY95 495 aa17.51■□□□□ 0.39
CMTM3-211ENST00000565922 CREB3L2Q70SY1 520 aa17.51■□□□□ 0.39
CMTM3-211ENST00000565922 CPLX4Q7Z7G2 160 aa17.51■□□□□ 0.39
CMTM3-211ENST00000565922 C17orf78Q8N4C9 275 aa17.51■□□□□ 0.39
CMTM3-211ENST00000565922 ADPRHL1Q8NDY3 354 aa17.51■□□□□ 0.39
CMTM3-211ENST00000565922 VANGL1Q8TAA9 524 aaPredicted RBP17.51■□□□□ 0.39
CMTM3-211ENST00000565922 TAAR8Q969N4 342 aa17.51■□□□□ 0.39
CMTM3-211ENST00000565922 ZNF583Q96ND8 569 aa17.51■□□□□ 0.39
CMTM3-211ENST00000565922 OXGR1Q96P68 337 aa17.51■□□□□ 0.39
CMTM3-211ENST00000565922 ZNF385AQ96PM9 386 aaKnown RBP17.51■□□□□ 0.39
CMTM3-211ENST00000565922 PIP5K1AQ99755 562 aa17.51■□□□□ 0.39
CMTM3-211ENST00000565922 HOPXQ9BPY8 73 aaPredicted RBP17.51■□□□□ 0.39
CMTM3-211ENST00000565922 EFCAB1Q9HAE3 211 aa17.51■□□□□ 0.39
CMTM3-211ENST00000565922 RNF115Q9Y4L5 304 aa17.51■□□□□ 0.39
CMTM3-211ENST00000565922 KRT33AO76009 404 aa17.5■□□□□ 0.39
CMTM3-211ENST00000565922 CD3EP07766 207 aa17.5■□□□□ 0.39
CMTM3-211ENST00000565922 CD53P19397 219 aa17.5■□□□□ 0.39
CMTM3-211ENST00000565922 MPGP29372 298 aa17.5■□□□□ 0.39
CMTM3-211ENST00000565922 GRPRP30550 384 aa17.5■□□□□ 0.39
CMTM3-211ENST00000565922 HOXC12P31275 282 aa17.5■□□□□ 0.39
CMTM3-211ENST00000565922 LSP1P33241 339 aa17.5■□□□□ 0.39
CMTM3-211ENST00000565922 NCMAPQ5T1S8 102 aa17.5■□□□□ 0.39
CMTM3-211ENST00000565922 TSPO2Q5TGU0 170 aa17.5■□□□□ 0.39
CMTM3-211ENST00000565922 H1FNTQ75WM6 255 aaPredicted RBP17.5■□□□□ 0.39
CMTM3-211ENST00000565922 ZIC4Q8N9L1 334 aa17.5■□□□□ 0.39
CMTM3-211ENST00000565922 SCAIQ8N9R8 606 aa17.5■□□□□ 0.39
CMTM3-211ENST00000565922 ADAMTS16Q8TE57 1224 aa17.5■□□□□ 0.39
CMTM3-211ENST00000565922 CMTM5Q96DZ9 223 aa17.5■□□□□ 0.39
CMTM3-211ENST00000565922 MPP4Q96JB8 637 aa17.5■□□□□ 0.39
CMTM3-211ENST00000565922 WFDC6Q9BQY6 131 aa17.5■□□□□ 0.39
CMTM3-211ENST00000565922 TMEM204Q9BSN7 226 aa17.5■□□□□ 0.39
CMTM3-211ENST00000565922 ASPNQ9BXN1 380 aa17.5■□□□□ 0.39
CMTM3-211ENST00000565922 POLR2J2Q9GZM3 115 aaKnown RBP17.5■□□□□ 0.39
CMTM3-211ENST00000565922 FAM107BQ9H098 131 aa17.5■□□□□ 0.39
CMTM3-211ENST00000565922 PCDHAC1Q9H158 963 aa17.5■□□□□ 0.39
CMTM3-211ENST00000565922 POLR2J3Q9H1A7 115 aaKnown RBP17.5■□□□□ 0.39
CMTM3-211ENST00000565922 SLC7A10Q9NS82 523 aa17.5■□□□□ 0.39
CMTM3-211ENST00000565922 RCE1Q9Y256 329 aa17.5■□□□□ 0.39
CMTM3-211ENST00000565922 MED13LQ71F56 2210 aa17.49■□□□□ 0.39
CMTM3-211ENST00000565922 ELOVL7A1L3X0 281 aa17.49■□□□□ 0.39
CMTM3-211ENST00000565922 TRAPPC13A5PLN9 417 aa17.49■□□□□ 0.39
CMTM3-211ENST00000565922 CPSF4LA6NMK7 179 aaKnown RBP17.49■□□□□ 0.39
CMTM3-211ENST00000565922 M0R082 166 aa17.49■□□□□ 0.39
CMTM3-211ENST00000565922 PDLIM1O00151 329 aa17.49■□□□□ 0.39
CMTM3-211ENST00000565922 MT-ATP6P00846 226 aa17.49■□□□□ 0.39
CMTM3-211ENST00000565922 NQO1P15559 274 aaKnown RBP17.49■□□□□ 0.39
CMTM3-211ENST00000565922 SEC24CP53992 1094 aa17.49■□□□□ 0.39
CMTM3-211ENST00000565922 C1DQ13901 141 aaKnown RBP17.49■□□□□ 0.39
CMTM3-211ENST00000565922 MICU2Q8IYU8 434 aa17.49■□□□□ 0.39
CMTM3-211ENST00000565922 ZNF417Q8TAU3 575 aa17.49■□□□□ 0.39
CMTM3-211ENST00000565922 MUS81Q96NY9 551 aa17.49■□□□□ 0.39
CMTM3-211ENST00000565922 ZNF587Q96SQ5 575 aaPredicted RBP17.49■□□□□ 0.39
CMTM3-211ENST00000565922 CCL19Q99731 98 aa17.49■□□□□ 0.39
CMTM3-211ENST00000565922 AMBRA1Q9C0C7 1298 aa17.49■□□□□ 0.39
CMTM3-211ENST00000565922 HEATR1Q9H583 2144 aaKnown RBP17.48■□□□□ 0.39
CMTM3-211ENST00000565922 LOC102725191A0A1B0GVB3 256 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms