RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 SMYD1Q8NB12 490 aa10.85□□□□□ -0.67
SPG7-211ENST00000565370 C1orf162Q8NEQ5 155 aaPredicted RBP10.85□□□□□ -0.67
SPG7-211ENST00000565370 C10orf82Q8WW14 230 aa10.85□□□□□ -0.67
SPG7-211ENST00000565370 LRRC58Q96CX6 371 aa10.85□□□□□ -0.67
SPG7-211ENST00000565370 SLCO5A1Q9H2Y9 848 aa10.85□□□□□ -0.67
SPG7-211ENST00000565370 CORINQ9Y5Q5 1042 aa10.85□□□□□ -0.67
SPG7-211ENST00000565370 MAGED1Q9Y5V3 778 aaPredicted RBP10.85□□□□□ -0.67
SPG7-211ENST00000565370 PRRC2AP48634 2157 aaKnown RBP10.84□□□□□ -0.67
SPG7-211ENST00000565370 RAI1Q7Z5J4 1906 aaPredicted RBP10.84□□□□□ -0.67
SPG7-211ENST00000565370 NF1P21359 2839 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 A0A0B4J2E0 115 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 A0A1B0GX12 115 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 ZNF587BE7ETH6 402 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 M0QX08 132 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 M0R3H8 397 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 ARHGEF9O43307 516 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 CHP2O43745 196 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 TPST1O60507 370 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 CCDC22O60826 627 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 NQO1P15559 274 aaKnown RBP10.84□□□□□ -0.67
SPG7-211ENST00000565370 ZNF43P17038 809 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 EDNRAP25101 427 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 LOXP28300 417 aaPredicted RBP10.84□□□□□ -0.67
SPG7-211ENST00000565370 C1DQ13901 141 aaKnown RBP10.84□□□□□ -0.67
SPG7-211ENST00000565370 OR1Q1Q15612 314 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 NRF1Q16656 503 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 RABL3Q5HYI8 236 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 NCMAPQ5T1S8 102 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 C1QTNF12Q5T7M4 302 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 SHEQ5VZ18 495 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 NANOGP8Q6NSW7 305 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 ZNF613Q6PF04 617 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 TMEM108Q6UXF1 575 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 COMTD1Q86VU5 262 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 TGIF2LYQ8IUE0 185 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 P3H2Q8IVL5 708 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 LRRC75A-AS1Q8N1F1 130 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 ADPRHL1Q8NDY3 354 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 TMEM171Q8WVE6 324 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 PROX1Q92786 737 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 FBXW5Q969U6 566 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 KTI12Q96EK9 354 aaPredicted RBP10.84□□□□□ -0.67
SPG7-211ENST00000565370 MCHR1Q99705 422 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 ARHGDIGQ99819 225 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 TMEM204Q9BSN7 226 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 PTDSS2Q9BVG9 487 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 ASPNQ9BXN1 380 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 CXorf56Q9H5V9 222 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 NANOGQ9H9S0 305 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 RCE1Q9Y256 329 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 B3GALT5Q9Y2C3 310 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 AP3M1Q9Y2T2 418 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 AMDHD2Q9Y303 409 aa10.84□□□□□ -0.67
SPG7-211ENST00000565370 A0A087WUJ7 227 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 LOC100653049A0A140TA62 436 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 FAM220BPB1ANY3 271 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 FTCDNL1E5RQL4 147 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 M0R082 166 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 FXYD1O00168 92 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 KRT34O76011 436 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 LGI1O95970 557 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 CD247P20963 164 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 MPGP29372 298 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 EGR4Q05215 589 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 BSPH1Q075Z2 132 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 VEZF1Q14119 521 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 TSPO2Q5TGU0 170 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 NIPAL3Q6P499 406 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 CCDC80Q76M96 950 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 C10orf53Q8N6V4 93 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 ZNF611Q8N823 705 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 OR6S1Q8NH40 331 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 OR52N5Q8NH56 324 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 RP9Q8TA86 221 aaKnown RBP10.83□□□□□ -0.68
SPG7-211ENST00000565370 VANGL1Q8TAA9 524 aaPredicted RBP10.83□□□□□ -0.68
SPG7-211ENST00000565370 ZNF417Q8TAU3 575 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 AKAP1Q92667 903 aaKnown RBP eCLIP10.83□□□□□ -0.68
SPG7-211ENST00000565370 RADILQ96JH8 1075 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 ZNF385AQ96PM9 386 aaKnown RBP10.83□□□□□ -0.68
SPG7-211ENST00000565370 ALKBH3Q96Q83 286 aaPredicted RBP10.83□□□□□ -0.68
SPG7-211ENST00000565370 ZNF587Q96SQ5 575 aaPredicted RBP10.83□□□□□ -0.68
SPG7-211ENST00000565370 TMEM43Q9BTV4 400 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 SLC7A10Q9NS82 523 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 FAIMQ9NVQ4 179 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 ARMCX1Q9P291 453 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 BAG5Q9UL15 447 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 MGAT4BQ9UQ53 548 aa10.83□□□□□ -0.68
SPG7-211ENST00000565370 IGKV1D-42A0A075B6H8 117 aa10.82□□□□□ -0.68
SPG7-211ENST00000565370 TRAPPC13A5PLN9 417 aa10.82□□□□□ -0.68
SPG7-211ENST00000565370 CPSF4LA6NMK7 179 aaKnown RBP10.82□□□□□ -0.68
SPG7-211ENST00000565370 FZD7O75084 574 aa10.82□□□□□ -0.68
SPG7-211ENST00000565370 SLC43A1O75387 559 aa10.82□□□□□ -0.68
SPG7-211ENST00000565370 WNT11O96014 354 aa10.82□□□□□ -0.68
SPG7-211ENST00000565370 MT-ATP6P00846 226 aa10.82□□□□□ -0.68
SPG7-211ENST00000565370 ITGA5P08648 1049 aa10.82□□□□□ -0.68
SPG7-211ENST00000565370 CD99P14209 185 aa10.82□□□□□ -0.68
SPG7-211ENST00000565370 GRPRP30550 384 aa10.82□□□□□ -0.68
SPG7-211ENST00000565370 P2RY4P51582 365 aa10.82□□□□□ -0.68
SPG7-211ENST00000565370 CDH11P55287 796 aa10.82□□□□□ -0.68
SPG7-211ENST00000565370 SH3BGRP55822 239 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms