RNA–Protein interactions for RNA: ENST00000564208.5

TAF1C-209, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, human

TSL 2

Gene TAF1C, Length 3,810 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1C-209	ENST00000564208	CXCL12	P48061	93 aa		10.38	□□□□□ -0.75
TAF1C-209	ENST00000564208	OC90	Q02509	493 aa	Predicted RBP	10.38	□□□□□ -0.75
TAF1C-209	ENST00000564208	TSPAN31	Q12999	210 aa		10.38	□□□□□ -0.75
TAF1C-209	ENST00000564208	SNTB2	Q13425	540 aa	Known RBP	10.38	□□□□□ -0.75
TAF1C-209	ENST00000564208	GALE	Q14376	348 aa		10.38	□□□□□ -0.75
TAF1C-209	ENST00000564208	EIPR1	Q53HC9	387 aa		10.38	□□□□□ -0.75
TAF1C-209	ENST00000564208	SLC36A4	Q6YBV0	504 aa		10.38	□□□□□ -0.75
TAF1C-209	ENST00000564208	ZNF782	Q6ZMW2	699 aa	Predicted RBP	10.38	□□□□□ -0.75
TAF1C-209	ENST00000564208	BMP8A	Q7Z5Y6	402 aa		10.38	□□□□□ -0.75
TAF1C-209	ENST00000564208	ATOH1	Q92858	354 aa	Predicted RBP	10.38	□□□□□ -0.75
TAF1C-209	ENST00000564208	RFK	Q969G6	155 aa		10.38	□□□□□ -0.75
TAF1C-209	ENST00000564208	SMIM10	Q96HG1	83 aa		10.38	□□□□□ -0.75
TAF1C-209	ENST00000564208	TNFRSF13C	Q96RJ3	184 aa		10.38	□□□□□ -0.75
TAF1C-209	ENST00000564208	ZNF559	Q9BR84	538 aa		10.38	□□□□□ -0.75
TAF1C-209	ENST00000564208	NUDT22	Q9BRQ3	303 aa		10.38	□□□□□ -0.75
TAF1C-209	ENST00000564208	FN3K	Q9H479	309 aa		10.38	□□□□□ -0.75
TAF1C-209	ENST00000564208	LYRM4	Q9HD34	91 aa		10.38	□□□□□ -0.75
TAF1C-209	ENST00000564208	ZMAT5	Q9UDW3	170 aa	Known RBP	10.38	□□□□□ -0.75
TAF1C-209	ENST00000564208	TES	Q9UGI8	421 aa	Known RBP	10.38	□□□□□ -0.75
TAF1C-209	ENST00000564208	MKL2	Q9ULH7	1088 aa		10.38	□□□□□ -0.75
TAF1C-209	ENST00000564208	SF3B6	Q9Y3B4	125 aa	Known RBP	10.38	□□□□□ -0.75
TAF1C-209	ENST00000564208	TRDV1	A0A1B0GX56	115 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	FAM25E	A8MYX2	175 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	ADAM11	O75078	769 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	PDGFB	P01127	241 aa	Predicted RBP	10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	IGKV1D-16	P01601	117 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	NID1	P14543	1247 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	NAA10	P41227	235 aa	Predicted RBP	10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	STAR	P49675	285 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	SKP1	P63208	163 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	PSG6	Q00889	435 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	OR11H7	Q8NGC8	314 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	ZNF563	Q8TA94	476 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	OR51J1	Q9H342	316 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	SIDT1	Q9NXL6	827 aa	Known RBP	10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	MAB21L2	Q9Y586	359 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	DENND4A	Q7Z401	1863 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208		A0A1B0GWA3	101 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	UNC119B	A6NIH7	251 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	SLC35E2	P0CK97	266 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	LIMS3	P0CW19	117 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	LIMS4	P0CW20	117 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	LCN1	P31025	176 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	SLC1A3	P43003	542 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	EXOSC2	Q13868	293 aa	Known RBP	10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	HYAL4	Q2M3T9	481 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	HLA-DQA1	Q5Y7H0	255 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	OR6K6	Q8NGW6	343 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	SPRYD4	Q8WW59	207 aa	Predicted RBP	10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	ARHGAP9	Q9BRR9	750 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	C1QTNF6	Q9BXI9	259 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	OR10A5	Q9H207	317 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	SAV1	Q9H4B6	383 aa	Predicted RBP	10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	HINT3	Q9NQE9	182 aa	Known RBP	10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	FLRT3	Q9NZU0	649 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	UBQLN2	Q9UHD9	624 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	ELF5	Q9UKW6	265 aa	Predicted RBP	10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	PLCL2	Q9UPR0	1127 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	EXOSC1	Q9Y3B2	195 aa	Known RBP	10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	MTRF1	O75570	445 aa	Known RBP	10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	ATP1B1	P05026	303 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	FAM157B	P0CG42	384 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	OMP	P47874	163 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	ODF4	Q2M2E3	257 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	THSD4	Q6ZMP0	1018 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	CEACAM19	Q7Z692	300 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	SDR9C7	Q8NEX9	313 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	ZDHHC12	Q96GR4	267 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	TCTN2	Q96GX1	697 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	ARHGDIG	Q99819	225 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	OR10A4	Q9H209	315 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	UBQLN3	Q9H347	655 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	CUTC	Q9NTM9	273 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	CACNG2	Q9Y698	323 aa		10.37	□□□□□ -0.75
TAF1C-209	ENST00000564208	TMEM129	A0AVI4	362 aa		10.36	□□□□□ -0.75
TAF1C-209	ENST00000564208	CDHR4	A6H8M9	788 aa		10.36	□□□□□ -0.75
TAF1C-209	ENST00000564208	SLC19A2	O60779	497 aa		10.36	□□□□□ -0.75
TAF1C-209	ENST00000564208	CD53	P19397	219 aa		10.36	□□□□□ -0.75
TAF1C-209	ENST00000564208	SLC6A1	P30531	599 aa		10.36	□□□□□ -0.75
TAF1C-209	ENST00000564208	ARHGDIB	P52566	201 aa		10.36	□□□□□ -0.75
TAF1C-209	ENST00000564208	GRK1	Q15835	563 aa		10.36	□□□□□ -0.75
TAF1C-209	ENST00000564208	SERPINA12	Q8IW75	414 aa		10.36	□□□□□ -0.75
TAF1C-209	ENST00000564208	ESX1	Q8N693	406 aa		10.36	□□□□□ -0.75
TAF1C-209	ENST00000564208	OSTF1	Q92882	214 aa		10.36	□□□□□ -0.75
TAF1C-209	ENST00000564208	CDX2	Q99626	313 aa	Predicted RBP	10.36	□□□□□ -0.75
TAF1C-209	ENST00000564208	KCNJ15	Q99712	375 aa		10.36	□□□□□ -0.75
TAF1C-209	ENST00000564208	NDC1	Q9BTX1	674 aa		10.36	□□□□□ -0.75
TAF1C-209	ENST00000564208	HCAR1	Q9BXC0	346 aa		10.36	□□□□□ -0.75
TAF1C-209	ENST00000564208	KRCC1	Q9NPI7	259 aa	Predicted RBP	10.36	□□□□□ -0.75
TAF1C-209	ENST00000564208	UBE2QL1	A1L167	161 aa		10.36	□□□□□ -0.75
TAF1C-209	ENST00000564208	LINC00862	A6NCI5	91 aa		10.36	□□□□□ -0.75
TAF1C-209	ENST00000564208	ATP6V1G2-DDX39B	F2Z307	99 aa		10.36	□□□□□ -0.75
TAF1C-209	ENST00000564208	HLA-DQB1	P01920	261 aa		10.36	□□□□□ -0.75
TAF1C-209	ENST00000564208	FOLR1	P15328	257 aa		10.36	□□□□□ -0.75
TAF1C-209	ENST00000564208	FGF9	P31371	208 aa	Predicted RBP	10.36	□□□□□ -0.75
TAF1C-209	ENST00000564208	PYCR1	P32322	319 aa		10.36	□□□□□ -0.75
TAF1C-209	ENST00000564208	ZNF136	P52737	540 aa		10.36	□□□□□ -0.75
TAF1C-209	ENST00000564208	DUSP8	Q13202	625 aa		10.36	□□□□□ -0.75
TAF1C-209	ENST00000564208	ATXN7L3	Q14CW9	347 aa	Predicted RBP	10.36	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms