RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 MPZL2O60487 215 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 IFNGP01579 166 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 HMGN1P05114 100 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 ADORA3P0DMS8 318 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 IMPDH2P12268 514 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 ZNF708P17019 499 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 SHC1P29353 583 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 NOS3P29474 1203 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 UQCRC1P31930 480 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 GGT2P36268 569 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 ADARB1P78563 741 aaKnown RBP11.52□□□□□ -0.57
CLK3-214ENST00000564096 FOXK1P85037 733 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 PUDPQ08623 228 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 PTGES3Q15185 160 aaKnown RBP11.52□□□□□ -0.57
CLK3-214ENST00000564096 PGGHGQ32M88 737 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 CMPK2Q5EBM0 449 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 RNFT1Q5M7Z0 435 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 C1QL3Q5VWW1 255 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 SLX4IPQ5VYV7 408 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 PAQR6Q6TCH4 344 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 DPY19L2P2Q6ZN68 376 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 H1FNTQ75WM6 255 aaPredicted RBP11.52□□□□□ -0.57
CLK3-214ENST00000564096 TRILQ7L0X0 811 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 CHMP1BQ7LBR1 199 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 HDDC2Q7Z4H3 204 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 KIF18BQ86Y91 864 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 UBQLNLQ8IYU4 475 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 TEX19Q8NA77 164 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 ANKK1Q8NFD2 765 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 SLC39A7Q92504 469 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 SARAFQ96BY9 339 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 SAMD8Q96LT4 415 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 POLDIP3Q9BY77 421 aaKnown RBP11.52□□□□□ -0.57
CLK3-214ENST00000564096 PLA2G12AQ9BZM1 189 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 DEFB127Q9H1M4 99 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 NDRG4Q9ULP0 352 aaKnown RBP11.52□□□□□ -0.57
CLK3-214ENST00000564096 LIPGQ9Y5X9 500 aa11.52□□□□□ -0.57
CLK3-214ENST00000564096 KMT2BQ9UMN6 2715 aaPredicted RBP11.52□□□□□ -0.57
CLK3-214ENST00000564096 A0A1W2PRG6 482 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 AQP7P3A6NL99 342 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 RIIAD1A6NNX1 92 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 NPIPA5E9PKD4 350 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 M0R3G1 203 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 AQP7O14520 342 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 RNF13O43567 381 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 DENRO43583 198 aaKnown RBP11.51□□□□□ -0.57
CLK3-214ENST00000564096 PTP4A3O75365 173 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 VAMP5O95183 116 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 SYNGR4O95473 234 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 APEHP13798 732 aaKnown RBP11.51□□□□□ -0.57
CLK3-214ENST00000564096 MYF6P23409 242 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 AHCYP23526 432 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 GRK5P34947 590 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 AQP2P41181 271 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 EIF1AXP47813 144 aaKnown RBP11.51□□□□□ -0.57
CLK3-214ENST00000564096 LHX2P50458 406 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 DAP3P51398 398 aaKnown RBP11.51□□□□□ -0.57
CLK3-214ENST00000564096 CLDN18P56856 261 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 RAC3P60763 192 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 IL5RAQ01344 420 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 RPL18Q07020 188 aaKnown RBP11.51□□□□□ -0.57
CLK3-214ENST00000564096 KLRB1Q12918 225 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 GINS1Q14691 196 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 PLEKHN1Q494U1 663 aaPredicted RBP11.51□□□□□ -0.57
CLK3-214ENST00000564096 NADK2Q4G0N4 442 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 ZNF691Q5VV52 312 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 FAM205BPQ63HN1 556 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 GGNQ86UU5 652 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 SIAH3Q8IW03 269 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 CHERPQ8IWX8 916 aaKnown RBP11.51□□□□□ -0.57
CLK3-214ENST00000564096 PM20D2Q8IYS1 436 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 LRRC17Q8N6Y2 441 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 OR8D4Q8NGM9 314 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 OR10D3Q8NH80 312 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 DNAJA3Q96EY1 480 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 CRELD1Q96HD1 420 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 CNBD2Q96M20 576 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 TAAR6Q96RI8 345 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 TNFRSF13CQ96RJ3 184 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 SLC25A18Q9H1K4 315 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 TSPAN10Q9H1Z9 355 aaPredicted RBP11.51□□□□□ -0.57
CLK3-214ENST00000564096 INIPQ9NRY2 104 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 MCTS1Q9ULC4 181 aaKnown RBP11.51□□□□□ -0.57
CLK3-214ENST00000564096 NPIPA1Q9UND3 350 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 RASD1Q9Y272 281 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 LRRC42Q9Y546 428 aa11.51□□□□□ -0.57
CLK3-214ENST00000564096 A0A0J9YW62 118 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 A0A1B0GVC2 190 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 OR14I1A6ND48 311 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 MCIDASD6RGH6 385 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 PLPP3O14495 311 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 AKAP8O43823 692 aaKnown RBP11.5□□□□□ -0.57
CLK3-214ENST00000564096 PPP1R3DO95685 299 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 OPN1LWP04000 364 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 TP53P04637 393 aaPredicted RBP11.5□□□□□ -0.57
CLK3-214ENST00000564096 CD14P08571 375 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 TSPAN19P0C672 248 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 FCGR2AP12318 317 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 ZNF3P17036 446 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 ENPP1P22413 925 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms