RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 CNIH4Q9P003 139 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 ASF1AQ9Y294 204 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 OR1A2Q9Y585 309 aa12.92□□□□□ -0.34
GTF3C1-203ENST00000562609 ATG2AQ2TAZ0 1938 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 KANTRA0A1W2PQU2 76 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 OR14I1A6ND48 311 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 FAM183AA6NL82 134 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 RLN1P04808 185 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 PTHLHP12272 177 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 FOLR2P14207 255 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 ABOP16442 354 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 GSTM3P21266 225 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 IL10RAQ13651 578 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 ACSM3Q53FZ2 586 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 BEX5Q5H9J7 111 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 C10orf91Q5T1B1 145 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 C3orf33Q6P1S2 294 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 MRGPREQ86SM8 312 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 NRSN1Q8IZ57 195 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 ACBD7Q8N6N7 88 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 MORN4Q8NDC4 146 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 C17orf47Q8NEP4 570 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 PLEKHA1Q9HB21 404 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 TREM1Q9NP99 234 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 H2AFY2Q9P0M6 372 aaPredicted RBP12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 MOKQ9UQ07 419 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 RFPL4AA6NLU0 287 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 RFPL4AL1F8VTS6 287 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 GABARAPH6UMI1 98 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 SLC2A10O95528 541 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 HTR1FP30939 366 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 COL9A2Q14055 689 aaPredicted RBP12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 MAPK14Q16539 360 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 PRSS53Q2L4Q9 553 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 HMGN2P46Q86SG4 172 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 LRRTM4Q86VH4 590 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 MUC20Q8N307 709 aaPredicted RBP12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 DNAAF1Q8NEP3 725 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 OR56A3Q8NH54 315 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 FCAMRQ8WWV6 532 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 NKX2-4Q9H2Z4 354 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 TREM2Q9NZC2 230 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 METTL1Q9UBP6 276 aaKnown RBP12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 IL20RAQ9UHF4 553 aa12.91□□□□□ -0.34
GTF3C1-203ENST00000562609 MYO10Q9HD67 2058 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 PAPLNO95428 1278 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 DRD3P35462 400 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 ADH7P40394 386 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 PNLIPRP2P54317 469 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 SLBPQ14493 270 aaKnown RBP eCLIP12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 RBM39Q14498 530 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 PDGFRLQ15198 375 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 RPE65Q16518 533 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 ZNF658BQ4V348 819 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 PARM1Q6UWI2 310 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 RPTNQ6XPR3 784 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 SLCO4C1Q6ZQN7 724 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 C11orf96Q7Z7L8 435 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 TMEM99Q8N816 258 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 OR4Q3Q8NH05 313 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 BRIX1Q8TDN6 353 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 PPP1R16AQ96I34 528 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 TIMP4Q99727 224 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 UTP23Q9BRU9 249 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 C8orf33Q9H7E9 229 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 RNF122Q9H9V4 155 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 MBNL1Q9NR56 388 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 POLE3Q9NRF9 147 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 TAS2R10Q9NYW0 307 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 TRAV14DV4A0A0A6YYC5 116 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 A0A0D9SG52 128 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 TMEM272A0A1B0GTI8 110 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 ZC3H12DA2A288 527 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 RHPN2P1A8MT19 583 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 REM1O75628 298 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 ASGR2P07307 311 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 FURINP09958 794 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 GNSP15586 552 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 GDI1P31150 447 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 ZNF763Q0D2J5 394 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 GRHL2Q6ISB3 625 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 JMJD6Q6NYC1 403 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 PLBD1Q6P4A8 553 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 PXKQ7Z7A4 578 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 ACOT11Q8WXI4 607 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 CXorf40BQ96DE9 158 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 RHOVQ96L33 236 aa12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 GAS2L1Q99501 681 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 AK6Q9Y3D8 172 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-203ENST00000562609 A0A1W2PP55 124 aa12.89□□□□□ -0.35
GTF3C1-203ENST00000562609 ANKRD20A5PA0PJZ0 165 aa12.89□□□□□ -0.35
GTF3C1-203ENST00000562609 METTL21EPA6NDL7 271 aa12.89□□□□□ -0.35
GTF3C1-203ENST00000562609 DBX1A6NMT0 343 aa12.89□□□□□ -0.35
GTF3C1-203ENST00000562609 PHYHO14832 338 aa12.89□□□□□ -0.35
GTF3C1-203ENST00000562609 SURF4O15260 269 aa12.89□□□□□ -0.35
GTF3C1-203ENST00000562609 TYRP1P17643 537 aa12.89□□□□□ -0.35
GTF3C1-203ENST00000562609 EIF2S3P41091 472 aaKnown RBP12.89□□□□□ -0.35
GTF3C1-203ENST00000562609 TAS2R38P59533 333 aa12.89□□□□□ -0.35
GTF3C1-203ENST00000562609 PON3Q15166 354 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms