RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 ISM1B1AKI9 464 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 GPR89AB7ZAQ6 455 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 SAP18O00422 153 aaKnown RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 RTCAO00442 366 aaKnown RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 LRRTM2O43300 516 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 ARHGEF9O43307 516 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 RNF13O43567 381 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 PLPP2O43688 288 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 GSTZ1O43708 216 aaPredicted RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 CHP2O43745 196 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 TLX2O43763 284 aaPredicted RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 ORC5O43913 435 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 PLOD3O60568 738 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 HPGDSO60760 199 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 OR2B3O76000 313 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 OR5F1O95221 314 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 LYPD3O95274 346 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 CRYZL1O95825 349 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 AIFM1O95831 613 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 CSF2P04141 144 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 THY1P04216 161 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 RPN2P04844 631 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 SERPIND1P05546 499 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 EIF4EP06730 217 aaKnown RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 POU2F2P09086 479 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 CISD3P0C7P0 127 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 GPR89BP0CG08 455 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 NR2F1P10589 423 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 TFPIP10646 304 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 PSKH1P11801 424 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 ACP5P13686 325 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 F3P13726 295 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 APEHP13798 732 aaKnown RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 ADRB3P13945 408 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 GNSP15586 552 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 TNNI3P19429 210 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 NPR2P20594 1047 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 M6PRP20645 277 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 SLC2A5P22732 501 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 PSMB5P28074 263 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 PRKAR1BP31321 381 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 EVI2BP34910 448 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 IFNGR2P38484 337 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 VIPR2P41587 438 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 HTR2BP41595 481 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 SSR2P43308 183 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 TSFMP43897 325 aaKnown RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 CAPZA2P47755 286 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 RFX3P48380 749 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 CCT3P49368 545 aaKnown RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 CCR8P51685 355 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 DGKEP52429 567 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 ZNF136P52737 540 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 METAP1P53582 386 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 AP2S1P53680 142 aaPredicted RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 ATP12AP54707 1039 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 FXYD6P3P58550 94 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 TAS2R38P59533 333 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 TAS2R43P59537 309 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 ERVK-21P61565 698 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 CSNK1G2P78368 415 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 DEFB103AP81534 67 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 DHODHQ02127 395 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 SP3Q02447 781 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 TLE2Q04725 743 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 MXD1Q05195 221 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 ST3GAL3Q11203 375 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 PIN1Q13526 163 aaPredicted RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 GPR176Q14439 515 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 NFE2L1Q14494 772 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 ELAVL3Q14576 367 aaKnown RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 ANGPT1Q15389 498 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 TRAM1Q15629 374 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 ZIC1Q15915 447 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 SNAPC1Q16533 368 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 WSCD2Q2TBF2 565 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 BTBD16Q32M84 506 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 ZNF791Q3KP31 576 aaPredicted RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 CCDC58Q4VC31 144 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 TMEM35AQ53FP2 167 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 EIPR1Q53HC9 387 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 NDUFAF5Q5TEU4 345 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 GARNL3Q5VVW2 1013 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 RAET1GQ6H3X3 334 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 SDE2Q6IQ49 451 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 HEPHL1Q6MZM0 1159 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 SLC48A1Q6P1K1 146 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 ZNF322Q6U7Q0 402 aaPredicted RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 PAMR1Q6UXH9 720 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 BAIAP2L2Q6UXY1 529 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.25□□□□□ -2.05
SPG11-223ENST00000560858 FRRS1Q6ZNA5 592 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 TMEM91Q6ZNR0 172 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 PLEKHM3Q6ZWE6 761 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 RTL10Q7L3V2 364 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 ANKRD33Q7Z3H0 272 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 ADCK2Q7Z695 626 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 PXKQ7Z7A4 578 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 ABI3BPQ7Z7G0 1075 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 ASPGQ86U10 573 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms