RNA–Protein interactions for RNA: ENST00000560173.1

LDLR-211, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-211ENST00000560173 KTI12Q96EK9 354 aaPredicted RBP8.32□□□□□ -1.08
LDLR-211ENST00000560173 C14orf79Q96F83 325 aa8.32□□□□□ -1.08
LDLR-211ENST00000560173 SLC47A1Q96FL8 570 aa8.32□□□□□ -1.08
LDLR-211ENST00000560173 LRGUKQ96M69 825 aa8.32□□□□□ -1.08
LDLR-211ENST00000560173 ZNF300Q96RE9 604 aaPredicted RBP8.32□□□□□ -1.08
LDLR-211ENST00000560173 KCTD14Q9BQ13 255 aaPredicted RBP8.32□□□□□ -1.08
LDLR-211ENST00000560173 PCDHAC1Q9H158 963 aa8.32□□□□□ -1.08
LDLR-211ENST00000560173 ELOVL5Q9NYP7 299 aa8.32□□□□□ -1.08
LDLR-211ENST00000560173 CRIM1Q9NZV1 1036 aa8.32□□□□□ -1.08
LDLR-211ENST00000560173 SELENONQ9NZV5 590 aa8.32□□□□□ -1.08
LDLR-211ENST00000560173 EMC3Q9P0I2 261 aa8.32□□□□□ -1.08
LDLR-211ENST00000560173 SLC9A8Q9Y2E8 581 aa8.32□□□□□ -1.08
LDLR-211ENST00000560173 HRNRQ86YZ3 2850 aaPredicted RBP8.32□□□□□ -1.08
LDLR-211ENST00000560173 HIVEP1P15822 2718 aa8.32□□□□□ -1.08
LDLR-211ENST00000560173 FREM1Q5H8C1 2179 aa8.32□□□□□ -1.08
LDLR-211ENST00000560173 TRAV36DV7A0A075B6V5 113 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 A0A087WUJ7 227 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 AQP7P3A6NL99 342 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 CPSF4LA6NMK7 179 aaKnown RBP8.31□□□□□ -1.08
LDLR-211ENST00000560173 CHP2O43745 196 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 PDE5AO76074 875 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 AKR7A3O95154 331 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 THY1P04216 161 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 POU2F1P14859 743 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 TNFRSF1BP20333 461 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 EDNRAP25101 427 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 SSTR2P30874 369 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 VHLP40337 213 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 OR3A2P47893 321 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 P2RY4P51582 365 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 FAM27E3Q08E93 113 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 ENTPD8Q5MY95 495 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 OTUD3Q5T2D3 398 aaPredicted RBP8.31□□□□□ -1.08
LDLR-211ENST00000560173 C5orf46Q6UWT4 87 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 GALNT5Q7Z7M9 940 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 STK32CQ86UX6 486 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 P3H2Q8IVL5 708 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 TMEM99Q8N816 258 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 MFSD8Q8NHS3 518 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 FAM222BQ8WU58 562 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 CCDC124Q96CT7 223 aaKnown RBP8.31□□□□□ -1.08
LDLR-211ENST00000560173 CLPTM1LQ96KA5 538 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 NAA11Q9BSU3 229 aaPredicted RBP8.31□□□□□ -1.08
LDLR-211ENST00000560173 TMEM43Q9BTV4 400 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 TAPBPLQ9BX59 468 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 C12orf49Q9H741 205 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 S100A14Q9HCY8 104 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 C6orf203Q9P0P8 240 aaPredicted RBP8.31□□□□□ -1.08
LDLR-211ENST00000560173 SH3GLB1Q9Y371 365 aa8.31□□□□□ -1.08
LDLR-211ENST00000560173 TRAPPC13A5PLN9 417 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 TUBAL3A6NHL2 446 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 AQP12BA6NM10 295 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 GPR171O14626 319 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 GSTA4O15217 222 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 OR2T1O43869 369 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 GGT1P19440 569 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 UGT2B10P36537 528 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 RPS5P46782 204 aaKnown RBP8.3□□□□□ -1.08
LDLR-211ENST00000560173 SELENOWP63302 87 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 TLE4Q04727 773 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 SLC17A1Q14916 467 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 FXNQ16595 210 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 EXOC3L2Q2M3D2 409 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 MTX3Q5HYI7 312 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 FAM69AQ5T7M9 428 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 LINC00114Q6XXX2 140 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 STAC2Q6ZMT1 411 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 WDR88Q6ZMY6 472 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 BEND4Q6ZU67 534 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 VTCN1Q7Z7D3 282 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 DHFR2Q86XF0 187 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 AQP12AQ8IXF9 295 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 GABRG1Q8N1C3 465 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 RNF148Q8N7C7 305 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 OR9K2Q8NGE7 335 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 OR6S1Q8NH40 331 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 LINC01560Q8TB33 94 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 RNF217Q8TC41 542 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 ADAMTS16Q8TE57 1224 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 TAAR8Q969N4 342 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 ZNF775Q96BV0 537 aaPredicted RBP8.3□□□□□ -1.08
LDLR-211ENST00000560173 RSRC1Q96IZ7 334 aaKnown RBP8.3□□□□□ -1.08
LDLR-211ENST00000560173 TPD52L3Q96J77 140 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 ADPRHL2Q9NX46 363 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 CD300AQ9UGN4 299 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 SLC7A7Q9UM01 511 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 TESMINQ9Y4I5 508 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 FLVCR1Q9Y5Y0 555 aa8.3□□□□□ -1.08
LDLR-211ENST00000560173 MED13LQ71F56 2210 aa8.29□□□□□ -1.08
LDLR-211ENST00000560173 ROS1P08922 2347 aa8.29□□□□□ -1.08
LDLR-211ENST00000560173 SH3D21A4FU49 640 aa8.29□□□□□ -1.08
LDLR-211ENST00000560173 C16orf97H3BN30 126 aa8.29□□□□□ -1.08
LDLR-211ENST00000560173 M0R082 166 aa8.29□□□□□ -1.08
LDLR-211ENST00000560173 KRT36O76013 467 aa8.29□□□□□ -1.08
LDLR-211ENST00000560173 OR5F1O95221 314 aa8.29□□□□□ -1.08
LDLR-211ENST00000560173 ZNF682O95780 498 aa8.29□□□□□ -1.08
LDLR-211ENST00000560173 SERPINA1P01009 418 aa8.29□□□□□ -1.08
LDLR-211ENST00000560173 BGLAPP02818 100 aa8.29□□□□□ -1.08
LDLR-211ENST00000560173 UMPSP11172 480 aa8.29□□□□□ -1.08
LDLR-211ENST00000560173 EPXP11678 715 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms