RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 ETS2P15036 469 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 SLC6A2P23975 617 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 ACAA2P42765 397 aaKnown RBP11.02□□□□□ -0.65
SNX1-209ENST00000559961 EFNA4P52798 201 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 IRX1P78414 480 aaPredicted RBP11.02□□□□□ -0.65
SNX1-209ENST00000559961 MFSD13AQ14CX5 517 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 CHRFAM7AQ494W8 412 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 RPS26P11Q5JNZ5 115 aaPredicted RBP11.02□□□□□ -0.65
SNX1-209ENST00000559961 GCNT6Q5T4J0 391 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 PODNL1Q6PEZ8 512 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 CREB3L2Q70SY1 520 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 SERPINA11Q86U17 422 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 SNX32Q86XE0 403 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 CLIP4Q8N3C7 705 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 WDR31Q8NA23 367 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 SLC38A4Q969I6 547 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 FBXO17Q96EF6 278 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 ZNF385AQ96PM9 386 aaKnown RBP11.02□□□□□ -0.65
SNX1-209ENST00000559961 OR52B2Q96RD2 323 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 EPYCQ99645 322 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 AMBRA1Q9C0C7 1298 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 RABEP2Q9H5N1 569 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 TMEM27Q9HBJ8 222 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 BCL2L10Q9HD36 194 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 A4GALTQ9NPC4 353 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 B3GAT2Q9NPZ5 323 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 PCDHB14Q9Y5E9 798 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 DSPPQ9NZW4 1301 aa11.02□□□□□ -0.65
SNX1-209ENST00000559961 H7C417 338 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 PDLIM1O00151 329 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 NR5A2O00482 541 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 AIM2O14862 343 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 FRS3O43559 492 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 NDUFS7O75251 213 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 C1QCP02747 245 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 NQO1P15559 274 aaKnown RBP11.01□□□□□ -0.65
SNX1-209ENST00000559961 PRKAR1BP31321 381 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 NTF4P34130 210 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 RPS5P46782 204 aaKnown RBP11.01□□□□□ -0.65
SNX1-209ENST00000559961 CAPZA2P47755 286 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 CLDN17P56750 224 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 SPOCK1Q08629 439 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 CARTPTQ16568 116 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 HIKESHIQ53FT3 197 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 REEP3Q6NUK4 255 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 ANKRD16Q6P6B7 361 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 SLC2A7Q6PXP3 512 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 EPGNQ6UW88 154 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 SLC46A3Q7Z3Q1 461 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 CCDC36Q8IYA8 594 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 C10orf53Q8N6V4 93 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 OR4F15Q8NGB8 312 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 GTF2H4Q92759 462 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 PROX1Q92786 737 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 C3orf49Q96BT1 292 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 SLC47A1Q96FL8 570 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 C7orf26Q96N11 449 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 OXGR1Q96P68 337 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 SLC38A2Q96QD8 506 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 KCNK17Q96T54 332 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 EVA1AQ9H8M9 152 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 C12orf10Q9HB07 376 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.01□□□□□ -0.65
SNX1-209ENST00000559961 MOKQ9UQ07 419 aa11.01□□□□□ -0.65
SNX1-209ENST00000559961 ZNF469Q96JG9 3925 aaPredicted RBP11.01□□□□□ -0.65
SNX1-209ENST00000559961 USF3Q68DE3 2245 aa11□□□□□ -0.65
SNX1-209ENST00000559961 LGI1O95970 557 aa11□□□□□ -0.65
SNX1-209ENST00000559961 F12P00748 615 aaPredicted RBP11□□□□□ -0.65
SNX1-209ENST00000559961 PRG2P13727 222 aa11□□□□□ -0.65
SNX1-209ENST00000559961 SERPINF1P36955 418 aa11□□□□□ -0.65
SNX1-209ENST00000559961 SELENOPP49908 381 aa11□□□□□ -0.65
SNX1-209ENST00000559961 PDLIM4P50479 330 aa11□□□□□ -0.65
SNX1-209ENST00000559961 MVDP53602 400 aa11□□□□□ -0.65
SNX1-209ENST00000559961 FOXG1P55316 489 aaPredicted RBP11□□□□□ -0.65
SNX1-209ENST00000559961 CDK6Q00534 326 aa11□□□□□ -0.65
SNX1-209ENST00000559961 PLAURQ03405 335 aa11□□□□□ -0.65
SNX1-209ENST00000559961 TBRG1Q3YBR2 411 aa11□□□□□ -0.65
SNX1-209ENST00000559961 GTDC1Q4AE62 458 aa11□□□□□ -0.65
SNX1-209ENST00000559961 ALG10BQ5I7T1 473 aa11□□□□□ -0.65
SNX1-209ENST00000559961 FAM69AQ5T7M9 428 aa11□□□□□ -0.65
SNX1-209ENST00000559961 AGBL2Q5U5Z8 902 aa11□□□□□ -0.65
SNX1-209ENST00000559961 CYB5R2Q6BCY4 276 aa11□□□□□ -0.65
SNX1-209ENST00000559961 ULK3Q6PHR2 472 aa11□□□□□ -0.65
SNX1-209ENST00000559961 H1FNTQ75WM6 255 aaPredicted RBP11□□□□□ -0.65
SNX1-209ENST00000559961 RANBP3LQ86VV4 465 aaPredicted RBP11□□□□□ -0.65
SNX1-209ENST00000559961 PRIMA1Q86XR5 153 aa11□□□□□ -0.65
SNX1-209ENST00000559961 ZIC4Q8N9L1 334 aa11□□□□□ -0.65
SNX1-209ENST00000559961 ZNF540Q8NDQ6 660 aa11□□□□□ -0.65
SNX1-209ENST00000559961 PIK3C3Q8NEB9 887 aa11□□□□□ -0.65
SNX1-209ENST00000559961 ANKK1Q8NFD2 765 aa11□□□□□ -0.65
SNX1-209ENST00000559961 OR9I1Q8NGQ6 314 aa11□□□□□ -0.65
SNX1-209ENST00000559961 OR1K1Q8NGR3 316 aa11□□□□□ -0.65
SNX1-209ENST00000559961 MAL2Q969L2 176 aa11□□□□□ -0.65
SNX1-209ENST00000559961 TLCD1Q96CP7 247 aa11□□□□□ -0.65
SNX1-209ENST00000559961 SPDL1Q96EA4 605 aa11□□□□□ -0.65
SNX1-209ENST00000559961 TNFRSF13CQ96RJ3 184 aa11□□□□□ -0.65
SNX1-209ENST00000559961 VRK1Q99986 396 aaPredicted RBP11□□□□□ -0.65
SNX1-209ENST00000559961 PIMREGQ9BSJ6 248 aa11□□□□□ -0.65
SNX1-209ENST00000559961 CCDC28BQ9BUN5 200 aa11□□□□□ -0.65
SNX1-209ENST00000559961 KATNB1Q9BVA0 655 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms