RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 ANKRD27Q96NW4 1050 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 ZNF607Q96SK3 696 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 PIP5K1AQ99755 562 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 PTDSS2Q9BVG9 487 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 PARPBPQ9NWS1 579 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 TAS2R16Q9NYV7 291 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 CISD1Q9NZ45 108 aaKnown RBP11□□□□□ -0.65
SMAD3-208ENST00000558827 USP22Q9UPT9 525 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 ANGPT4Q9Y264 503 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 MAGED1Q9Y5V3 778 aaPredicted RBP11□□□□□ -0.65
SMAD3-208ENST00000558827 SLC25A15Q9Y619 301 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 IGKV1D-42A0A075B6H8 117 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 LOC100653049A0A140TA62 436 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 SHISA9B4DS77 424 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 M0R082 166 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 NPIPB7O75200 414 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 NDUFS7O75251 213 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 UPK3AO75631 287 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 KRT34O76011 436 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 MFN2O95140 757 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 INHBBP09529 407 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 GTF2E2P29084 291 aaKnown RBP10.99□□□□□ -0.65
SMAD3-208ENST00000558827 GRPRP30550 384 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 ARFIP2P53365 341 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 CDH11P55287 796 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 CLDN17P56750 224 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 NCALDP61601 193 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 LTBQ06643 244 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 DUSP7Q16829 419 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 ZSWIM7Q19AV6 140 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 ALG10BQ5I7T1 473 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 CREB3L2Q70SY1 520 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 LINGO2Q7L985 606 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 C10orf53Q8N6V4 93 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 C11orf65Q8NCR3 313 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 MAPK1IP1LQ8NDC0 245 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 GPR32P1Q8NGA4 272 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 ZNF417Q8TAU3 575 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 STK35Q8TDR2 534 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 FBXW5Q969U6 566 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 GTPBP3Q969Y2 492 aaKnown RBP10.99□□□□□ -0.65
SMAD3-208ENST00000558827 C18orf12Q96KH6 178 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 ZNF587Q96SQ5 575 aaPredicted RBP10.99□□□□□ -0.65
SMAD3-208ENST00000558827 MCHR1Q99705 422 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 SPATA5L1Q9BVQ7 753 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 TRIM2Q9C040 744 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 SLCO5A1Q9H2Y9 848 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 TMEM38AQ9H6F2 299 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 TMEM27Q9HBJ8 222 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 POU2F3Q9UKI9 436 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 CORO2BQ9UQ03 480 aa10.99□□□□□ -0.65
SMAD3-208ENST00000558827 A0A096LPE4 126 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 A0A1W2PPZ6 126 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 CPSF4LA6NMK7 179 aaKnown RBP10.98□□□□□ -0.65
SMAD3-208ENST00000558827 FTCDNL1E5RQL4 147 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 E7EQL1 145 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 PDLIM1O00151 329 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 SERPINB7O75635 380 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 SERPINI2O75830 405 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 CNOT4O95628 575 aaKnown RBP10.98□□□□□ -0.65
SMAD3-208ENST00000558827 TROVE2P10155 538 aaKnown RBP eCLIP10.98□□□□□ -0.65
SMAD3-208ENST00000558827 MAP2K6P52564 334 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 CDH12P55289 794 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 RPS4XP62701 263 aaKnown RBP10.98□□□□□ -0.65
SMAD3-208ENST00000558827 KLF10Q13118 480 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 PGGHGQ32M88 737 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 MMEL1Q495T6 779 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 RABL3Q5HYI8 236 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 CARD17Q5XLA6 110 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 SLC22A25Q6T423 547 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 B3GLCTQ6Y288 498 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 LRRC75A-AS1Q8N1F1 130 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 DPP10Q8N608 796 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 OR4D11Q8NGI4 311 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 MFSD8Q8NHS3 518 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 IGFBPL1Q8WX77 278 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 HTRA1Q92743 480 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 RADILQ96JH8 1075 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 MUS81Q96NY9 551 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 ALKBH3Q96Q83 286 aaPredicted RBP10.98□□□□□ -0.65
SMAD3-208ENST00000558827 CXorf56Q9H5V9 222 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 SLC17A5Q9NRA2 495 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 SELENONQ9NZV5 590 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 MALT1Q9UDY8 824 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 GDF2Q9UK05 429 aaPredicted RBP10.98□□□□□ -0.65
SMAD3-208ENST00000558827 ATP23Q9Y6H3 246 aa10.98□□□□□ -0.65
SMAD3-208ENST00000558827 ZANQ9Y493 2812 aa10.97□□□□□ -0.65
SMAD3-208ENST00000558827 SHOX2O60902 331 aaPredicted RBP10.97□□□□□ -0.65
SMAD3-208ENST00000558827 LY6G6DO95868 133 aa10.97□□□□□ -0.65
SMAD3-208ENST00000558827 HPRP00739 348 aa10.97□□□□□ -0.65
SMAD3-208ENST00000558827 CD8AP01732 235 aa10.97□□□□□ -0.65
SMAD3-208ENST00000558827 DANCRP0C864 163 aa10.97□□□□□ -0.65
SMAD3-208ENST00000558827 HLA-DOBP13765 273 aa10.97□□□□□ -0.65
SMAD3-208ENST00000558827 ZNF43P17038 809 aa10.97□□□□□ -0.65
SMAD3-208ENST00000558827 TNFRSF1BP20333 461 aa10.97□□□□□ -0.65
SMAD3-208ENST00000558827 CD40P25942 277 aa10.97□□□□□ -0.65
SMAD3-208ENST00000558827 MPGP29372 298 aa10.97□□□□□ -0.65
SMAD3-208ENST00000558827 C1DQ13901 141 aaKnown RBP10.97□□□□□ -0.65
SMAD3-208ENST00000558827 NPTX1Q15818 432 aa10.97□□□□□ -0.65
SMAD3-208ENST00000558827 NANOGP8Q6NSW7 305 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms