RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 MFSD8Q8NHS3 518 aa11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 PROX1Q92786 737 aa11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 ZBTB9Q96C00 473 aa11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 MAELQ96JY0 434 aaKnown RBP11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 ZNF385AQ96PM9 386 aaKnown RBP11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 RPS6KB2Q9UBS0 482 aa11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 FBXO9Q9UK97 447 aaPredicted RBP11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 CDC42EP3Q9UKI2 254 aa11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 FKBP7Q9Y680 259 aa11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 ALPK2Q86TB3 2170 aa11.91□□□□□ -0.5
SNRPA1-204ENST00000558020 MXRA5Q9NR99 2828 aa11.9□□□□□ -0.5
SNRPA1-204ENST00000558020 KLF11O14901 512 aa11.9□□□□□ -0.5
SNRPA1-204ENST00000558020 OR2T1O43869 369 aa11.9□□□□□ -0.5
SNRPA1-204ENST00000558020 MVDP53602 400 aa11.9□□□□□ -0.5
SNRPA1-204ENST00000558020 SH3BGRP55822 239 aaPredicted RBP11.9□□□□□ -0.5
SNRPA1-204ENST00000558020 STX1BP61266 288 aa11.9□□□□□ -0.5
SNRPA1-204ENST00000558020 SNRPD2P62316 118 aaKnown RBP11.9□□□□□ -0.5
SNRPA1-204ENST00000558020 BNIP2Q12982 314 aa11.9□□□□□ -0.5
SNRPA1-204ENST00000558020 FADDQ13158 208 aa11.9□□□□□ -0.5
SNRPA1-204ENST00000558020 MAPK11Q15759 364 aa11.9□□□□□ -0.5
SNRPA1-204ENST00000558020 TMEM249Q2WGJ8 235 aa11.9□□□□□ -0.5
SNRPA1-204ENST00000558020 CYB5R2Q6BCY4 276 aa11.9□□□□□ -0.5
SNRPA1-204ENST00000558020 C5orf46Q6UWT4 87 aa11.9□□□□□ -0.5
SNRPA1-204ENST00000558020 ANKK1Q8NFD2 765 aa11.9□□□□□ -0.5
SNRPA1-204ENST00000558020 TMEM19Q96HH6 336 aa11.9□□□□□ -0.5
SNRPA1-204ENST00000558020 KCNK17Q96T54 332 aa11.9□□□□□ -0.5
SNRPA1-204ENST00000558020 BCL2L10Q9HD36 194 aa11.9□□□□□ -0.5
SNRPA1-204ENST00000558020 SLC6A13Q9NSD5 602 aa11.9□□□□□ -0.5
SNRPA1-204ENST00000558020 MOKQ9UQ07 419 aa11.9□□□□□ -0.5
SNRPA1-204ENST00000558020 FBN1P35555 2871 aaKnown RBP11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 ATP6V1G2-DDX39BF2Z307 99 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 CLIC1O00299 241 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 GPRIN2O60269 458 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 ZNF500O60304 480 aaPredicted RBP11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 ERLIN1O75477 346 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 PRG2P13727 222 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 ZNF43P17038 809 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 USF1P22415 310 aaPredicted RBP11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 SERPINF1P36955 418 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 MAGOHP61326 146 aaKnown RBP11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 VLDLRP98155 873 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 C1DQ13901 141 aaKnown RBP11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 RGNQ15493 299 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 C3orf36Q3SXR2 165 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 SLC9B1Q4ZJI4 515 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 HIKESHIQ53FT3 197 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 NIPAL3Q6P499 406 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 ANKRD16Q6P6B7 361 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 B3GLCTQ6Y288 498 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 NET1Q7Z628 596 aaPredicted RBP11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 SERPINA11Q86U17 422 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 KRT73Q86Y46 540 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 ZNF525Q8N782 197 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 GOLGA6L1Q8N7Z2 621 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 OR1K1Q8NGR3 316 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 BBS10Q8TAM1 723 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 MAGEE2Q8TD90 523 aaPredicted RBP11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 VPS33AQ96AX1 596 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 SLC25A36Q96CQ1 311 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 FBXO17Q96EF6 278 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 SLC38A2Q96QD8 506 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 KATNB1Q9BVA0 655 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 SPATA5L1Q9BVQ7 753 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 BEX2Q9BXY8 128 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 LINC00470Q9BZP3 86 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 A4GALTQ9NPC4 353 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 SELENONQ9NZV5 590 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 PCDHB14Q9Y5E9 798 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 CR1P17927 2039 aa11.89□□□□□ -0.51
SNRPA1-204ENST00000558020 RTTNQ86VV8 2226 aa11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 NDUFS8O00217 210 aa11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 FRS3O43559 492 aa11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 NPIPB7O75200 414 aa11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 TGDSO95455 350 aa11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 LGI1O95970 557 aa11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 ERCC1P07992 297 aaPredicted RBP11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 PNMTP11086 282 aa11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 ETS2P15036 469 aa11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 PPIBP23284 216 aaKnown RBP11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 SELENOPP49908 381 aa11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 SLC25A3Q00325 362 aa11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 TBRG1Q3YBR2 411 aa11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 RPS26P11Q5JNZ5 115 aaPredicted RBP11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 C6orf52Q5T4I8 152 aa11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 FAM169BQ8N8A8 192 aa11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 ZNF540Q8NDQ6 660 aa11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 OR4F15Q8NGB8 312 aa11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 C10orf105Q8TEF2 133 aa11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 DNAJA4Q8WW22 397 aaPredicted RBP11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 TMEM158Q8WZ71 300 aa11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 HTRA1Q92743 480 aa11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 GTF2H4Q92759 462 aa11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 BCL2L2Q92843 193 aaPredicted RBP11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 C3orf49Q96BT1 292 aa11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 OXGR1Q96P68 337 aa11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 OR52B2Q96RD2 323 aa11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 C12orf10Q9HB07 376 aa11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 MYOZ1Q9NP98 299 aaPredicted RBP11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 LPAR3Q9UBY5 353 aa11.88□□□□□ -0.51
SNRPA1-204ENST00000558020 RCE1Q9Y256 329 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms