RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 ALKBH3Q96Q83 286 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-235ENST00000557740 KCNS3Q9BQ31 491 aa12.81□□□□□ -0.36
SHMT2-235ENST00000557740 TMBIM4Q9HC24 238 aa12.81□□□□□ -0.36
SHMT2-235ENST00000557740 A4GALTQ9NPC4 353 aa12.81□□□□□ -0.36
SHMT2-235ENST00000557740 OBP2BQ9NPH6 170 aa12.81□□□□□ -0.36
SHMT2-235ENST00000557740 TMEM45AQ9NWC5 275 aa12.81□□□□□ -0.36
SHMT2-235ENST00000557740 ADAM21Q9UKJ8 722 aa12.81□□□□□ -0.36
SHMT2-235ENST00000557740 RASD1Q9Y272 281 aa12.81□□□□□ -0.36
SHMT2-235ENST00000557740 PCDHB14Q9Y5E9 798 aa12.81□□□□□ -0.36
SHMT2-235ENST00000557740 ELOA3DA6NLF2 546 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-235ENST00000557740 CLIC1O00299 241 aa12.8□□□□□ -0.36
SHMT2-235ENST00000557740 POLR3GO15318 223 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-235ENST00000557740 NUDT7P0C024 238 aa12.8□□□□□ -0.36
SHMT2-235ENST00000557740 SELENOPP49908 381 aa12.8□□□□□ -0.36
SHMT2-235ENST00000557740 P2RY4P51582 365 aa12.8□□□□□ -0.36
SHMT2-235ENST00000557740 UBE2NP61088 152 aaKnown RBP12.8□□□□□ -0.36
SHMT2-235ENST00000557740 HOXC5Q00444 222 aa12.8□□□□□ -0.36
SHMT2-235ENST00000557740 ELOA3BQ3SY89 546 aa12.8□□□□□ -0.36
SHMT2-235ENST00000557740 NIPAL3Q6P499 406 aa12.8□□□□□ -0.36
SHMT2-235ENST00000557740 ELOA3Q8NG57 546 aa12.8□□□□□ -0.36
SHMT2-235ENST00000557740 MAL2Q969L2 176 aa12.8□□□□□ -0.36
SHMT2-235ENST00000557740 SLC35B4Q969S0 331 aa12.8□□□□□ -0.36
SHMT2-235ENST00000557740 SLC25A36Q96CQ1 311 aa12.8□□□□□ -0.36
SHMT2-235ENST00000557740 MDFIQ99750 246 aa12.8□□□□□ -0.36
SHMT2-235ENST00000557740 PAIP1Q9H074 479 aaKnown RBP12.8□□□□□ -0.36
SHMT2-235ENST00000557740 BCL2L10Q9HD36 194 aa12.8□□□□□ -0.36
SHMT2-235ENST00000557740 TCF7L2Q9NQB0 619 aa12.8□□□□□ -0.36
SHMT2-235ENST00000557740 CHST2Q9Y4C5 530 aa12.8□□□□□ -0.36
SHMT2-235ENST00000557740 PMF1-BGLAPU3KQ54 211 aa12.8□□□□□ -0.36
SHMT2-235ENST00000557740 NPIPB7O75200 414 aa12.79□□□□□ -0.36
SHMT2-235ENST00000557740 LGI1O95970 557 aa12.79□□□□□ -0.36
SHMT2-235ENST00000557740 PNMTP11086 282 aa12.79□□□□□ -0.36
SHMT2-235ENST00000557740 SLC25A16P16260 332 aa12.79□□□□□ -0.36
SHMT2-235ENST00000557740 APOBEC3AP31941 199 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-235ENST00000557740 RPS5P46782 204 aaKnown RBP12.79□□□□□ -0.36
SHMT2-235ENST00000557740 TBRG1Q3YBR2 411 aa12.79□□□□□ -0.36
SHMT2-235ENST00000557740 GCNT6Q5T4J0 391 aa12.79□□□□□ -0.36
SHMT2-235ENST00000557740 EPGNQ6UW88 154 aa12.79□□□□□ -0.36
SHMT2-235ENST00000557740 CREB3L2Q70SY1 520 aa12.79□□□□□ -0.36
SHMT2-235ENST00000557740 ZNF525Q8N782 197 aa12.79□□□□□ -0.36
SHMT2-235ENST00000557740 OR10H5Q8NGA6 315 aa12.79□□□□□ -0.36
SHMT2-235ENST00000557740 OR1K1Q8NGR3 316 aa12.79□□□□□ -0.36
SHMT2-235ENST00000557740 MFSD8Q8NHS3 518 aa12.79□□□□□ -0.36
SHMT2-235ENST00000557740 FAM168AQ92567 244 aa12.79□□□□□ -0.36
SHMT2-235ENST00000557740 C7orf26Q96N11 449 aa12.79□□□□□ -0.36
SHMT2-235ENST00000557740 SLC38A2Q96QD8 506 aa12.79□□□□□ -0.36
SHMT2-235ENST00000557740 MOKQ9UQ07 419 aa12.79□□□□□ -0.36
SHMT2-235ENST00000557740 DNHD1Q96M86 4753 aa12.78□□□□□ -0.36
SHMT2-235ENST00000557740 A8MV72 311 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-235ENST00000557740 NR5A2O00482 541 aa12.78□□□□□ -0.36
SHMT2-235ENST00000557740 CSF3P09919 207 aa12.78□□□□□ -0.36
SHMT2-235ENST00000557740 BMP2P12643 396 aa12.78□□□□□ -0.36
SHMT2-235ENST00000557740 ZNF43P17038 809 aa12.78□□□□□ -0.36
SHMT2-235ENST00000557740 PRKAR1BP31321 381 aa12.78□□□□□ -0.36
SHMT2-235ENST00000557740 EFNA4P52798 201 aa12.78□□□□□ -0.36
SHMT2-235ENST00000557740 SH3BGRP55822 239 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-235ENST00000557740 NCALDP61601 193 aa12.78□□□□□ -0.36
SHMT2-235ENST00000557740 LGALS3BPQ08380 585 aa12.78□□□□□ -0.36
SHMT2-235ENST00000557740 HMBOX1Q6NT76 420 aa12.78□□□□□ -0.36
SHMT2-235ENST00000557740 KRT73Q86Y46 540 aa12.78□□□□□ -0.36
SHMT2-235ENST00000557740 EPHX4Q8IUS5 362 aa12.78□□□□□ -0.36
SHMT2-235ENST00000557740 NFKBIDQ8NI38 313 aa12.78□□□□□ -0.36
SHMT2-235ENST00000557740 LRRC8CQ8TDW0 803 aa12.78□□□□□ -0.36
SHMT2-235ENST00000557740 BOD1Q96IK1 185 aa12.78□□□□□ -0.36
SHMT2-235ENST00000557740 RCE1Q9Y256 329 aa12.78□□□□□ -0.36
SHMT2-235ENST00000557740 FKBP7Q9Y680 259 aa12.78□□□□□ -0.36
SHMT2-235ENST00000557740 ALPK2Q86TB3 2170 aa12.78□□□□□ -0.36
SHMT2-235ENST00000557740 COL6A5A8TX70 2615 aa12.77□□□□□ -0.36
SHMT2-235ENST00000557740 FTCDNL1E5RQL4 147 aa12.77□□□□□ -0.37
SHMT2-235ENST00000557740 AIM2O14862 343 aa12.77□□□□□ -0.37
SHMT2-235ENST00000557740 GPRIN2O60269 458 aa12.77□□□□□ -0.37
SHMT2-235ENST00000557740 TGDSO95455 350 aa12.77□□□□□ -0.37
SHMT2-235ENST00000557740 IFNA2P01563 188 aa12.77□□□□□ -0.37
SHMT2-235ENST00000557740 CRYAAP02489 173 aa12.77□□□□□ -0.37
SHMT2-235ENST00000557740 ETS2P15036 469 aa12.77□□□□□ -0.37
SHMT2-235ENST00000557740 HOXB9P17482 250 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-235ENST00000557740 PPIBP23284 216 aaKnown RBP12.77□□□□□ -0.37
SHMT2-235ENST00000557740 PAX7P23759 505 aa12.77□□□□□ -0.37
SHMT2-235ENST00000557740 MRPL19P49406 292 aaKnown RBP12.77□□□□□ -0.37
SHMT2-235ENST00000557740 CLDN17P56750 224 aa12.77□□□□□ -0.37
SHMT2-235ENST00000557740 SNRPD2P62316 118 aaKnown RBP12.77□□□□□ -0.37
SHMT2-235ENST00000557740 IL1RL1Q01638 556 aa12.77□□□□□ -0.37
SHMT2-235ENST00000557740 ROR2Q01974 943 aaKnown RBP12.77□□□□□ -0.37
SHMT2-235ENST00000557740 C1DQ13901 141 aaKnown RBP12.77□□□□□ -0.37
SHMT2-235ENST00000557740 TMEM249Q2WGJ8 235 aa12.77□□□□□ -0.37
SHMT2-235ENST00000557740 BEND6Q5SZJ8 279 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-235ENST00000557740 ANKRD16Q6P6B7 361 aa12.77□□□□□ -0.37
SHMT2-235ENST00000557740 C5orf46Q6UWT4 87 aa12.77□□□□□ -0.37
SHMT2-235ENST00000557740 C6orf89Q6UWU4 347 aa12.77□□□□□ -0.37
SHMT2-235ENST00000557740 SLC38A4Q969I6 547 aa12.77□□□□□ -0.37
SHMT2-235ENST00000557740 FBXO17Q96EF6 278 aa12.77□□□□□ -0.37
SHMT2-235ENST00000557740 KTI12Q96EK9 354 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-235ENST00000557740 ZNF317Q96PQ6 595 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-235ENST00000557740 TNFRSF13CQ96RJ3 184 aa12.77□□□□□ -0.37
SHMT2-235ENST00000557740 KATNB1Q9BVA0 655 aa12.77□□□□□ -0.37
SHMT2-235ENST00000557740 PTDSS2Q9BVG9 487 aa12.77□□□□□ -0.37
SHMT2-235ENST00000557740 SPATA5L1Q9BVQ7 753 aa12.77□□□□□ -0.37
SHMT2-235ENST00000557740 LINC00470Q9BZP3 86 aa12.77□□□□□ -0.37
SHMT2-235ENST00000557740 MOV10Q9HCE1 1003 aaKnown RBP12.77□□□□□ -0.37
SHMT2-235ENST00000557740 SLC25A37Q9NYZ2 338 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms