RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 OR5J2Q8NH18 312 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 TMEM255BQ8WV15 326 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 HIST1H2ACQ93077 130 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 ALPK1Q96QP1 1244 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 FUZQ9BT04 418 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 BDH2Q9BUT1 245 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 OSBPL10Q9BXB5 764 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 PIGMQ9H3S5 423 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 CHST11Q9NPF2 352 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 MEPEQ9NQ76 525 aaPredicted RBP12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 EMC9Q9Y3B6 208 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 TESMINQ9Y4I5 508 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 LYVE1Q9Y5Y7 322 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 A0A1W2PNV4 684 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 ENO4A6NNW6 628 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 TNFRSF11BO00300 401 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 GNGT2O14610 69 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 DVL2O14641 736 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 SMAD9O15198 467 aaKnown RBP12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 AKAP8O43823 692 aaKnown RBP12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 SS18L1O75177 396 aaPredicted RBP12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 OR7A10O76100 309 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 TGM6O95932 706 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 PLGP00747 810 aaPredicted RBP12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 OPN1LWP04000 364 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 ASAH2BP0C7U1 165 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 TMIGD3P0DMS9 266 aaPredicted RBP12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 FASP25445 335 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 GRPRP30550 384 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 CHRNB4P30926 498 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 DNAJA1P31689 397 aaKnown RBP12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 RASGEF1BQ0VAM2 473 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 PMPCAQ10713 525 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 ZP4Q12836 540 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 GUSBP1Q15486 140 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 SLC25A35Q3KQZ1 300 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 TMEM201Q5SNT2 666 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 TMEM225Q6GV28 225 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 PODNL1Q6PEZ8 512 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 SEM1Q6ZVN7 128 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 FAM214BQ7L5A3 538 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 FJX1Q86VR8 437 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 NRMQ8IXM6 262 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 ZNF808Q8N4W9 903 aaPredicted RBP12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 OR4K5Q8NGD3 323 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 BPIFA2Q96DR5 249 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 CCDC120Q96HB5 630 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 PSD2Q9BQI7 771 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 PARPBPQ9NWS1 579 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 C6orf203Q9P0P8 240 aaPredicted RBP12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 KLHL13Q9P2N7 655 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 RHCGQ9UBD6 479 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 SH3BGRL2Q9UJC5 107 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 SAMHD1Q9Y3Z3 626 aaKnown RBP12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 LRRK2Q5S007 2527 aa12.6□□□□□ -0.39
SUPT16H-208ENST00000557652 USP9XQ93008 2570 aaPredicted RBP12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 CLEC18AA5D8T8 446 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 NPIPB13A6NJU9 1138 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 OR6C65A6NJZ3 312 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 NPIPB4C9JG80 1138 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 CLOCKO15516 846 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 ZNHIT1O43257 154 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 RRP9O43818 475 aaKnown RBP12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 AQP8O94778 261 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 DIRAS1O95057 198 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 CNOT4O95628 575 aaKnown RBP12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 CH25HO95992 272 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 LDLRP01130 860 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 YES1P07947 543 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 TSPAN19P0C672 248 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 IFI30P13284 250 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 FUT1P19526 365 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 PRPS1P60891 318 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 PUDPQ08623 228 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 SLC17A1Q14916 467 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 KPNB1Q14974 876 aaKnown RBP12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 ATP6AP1Q15904 470 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 RPL13AP3Q6NVV1 102 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 CLEC18BQ6UXF7 455 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 HDDC2Q7Z4H3 204 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 PXKQ7Z7A4 578 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 MARVELD2Q8N4S9 558 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 FAM26EQ8N5C1 309 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 C10orf53Q8N6V4 93 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 C9orf106Q8NAJ2 232 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 CLEC18CQ8NCF0 446 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 OR6K3Q8NGY3 331 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 DNAJC9Q8WXX5 260 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 TMEM45BQ96B21 275 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 SLCO4A1Q96BD0 722 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 SLC25A36Q96CQ1 311 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 LRRC46Q96FV0 321 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 OXGR1Q96P68 337 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 DENND2DQ9H6A0 471 aaPredicted RBP12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 STX18Q9P2W9 335 aaKnown RBP12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 NOX1Q9Y5S8 564 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 FLNCQ14315 2725 aa12.59□□□□□ -0.39
SUPT16H-208ENST00000557652 TRBV4-1A0A0J9YWV2 114 aa12.58□□□□□ -0.4
SUPT16H-208ENST00000557652 WIPF3A6NGB9 483 aa12.58□□□□□ -0.4
SUPT16H-208ENST00000557652 ZNF716A6NP11 495 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms