RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 K7EP13 123 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 GPAA1O43292 621 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 FADS1O60427 444 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 TBX19O60806 448 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 LRCH4O75427 683 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 PDE5AO76074 875 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 STK17BO94768 372 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 AKR7A3O95154 331 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 AK1P00568 194 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 AGTP01019 485 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 APOC1P02654 83 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 GNAO1P09471 354 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 SMIM10L1P0DMW3 83 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 NCF2P19878 526 aaPredicted RBP1.39□□□□□ -2.19
HIF1A-212ENST00000557538 ATP6V1C1P21283 382 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 PDHA2P29803 388 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 UGT2B10P36537 528 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 CSNK1EP49674 416 aaKnown RBP1.39□□□□□ -2.19
HIF1A-212ENST00000557538 MEOX2P50222 304 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 FCHO2Q0JRZ9 810 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 SELENBP1Q13228 472 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 SNTB2Q13425 540 aaKnown RBP1.39□□□□□ -2.19
HIF1A-212ENST00000557538 DGCR6Q14129 220 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 GRB7Q14451 532 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 PON3Q15166 354 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 TAF1AQ15573 450 aaPredicted RBP1.39□□□□□ -2.19
HIF1A-212ENST00000557538 PSG3Q16557 428 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 PCK2Q16822 640 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 C17orf58Q2M2W7 97 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 ANKRD55Q3KP44 614 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 VWA2Q5GFL6 755 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 COQ5Q5HYK3 327 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 MARC1Q5VT66 337 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 FBXW9Q5XUX1 488 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 NIPAL1Q6NVV3 410 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 LRRC8BQ6P9F7 803 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 Q6ZPB1 254 aaPredicted RBP1.39□□□□□ -2.19
HIF1A-212ENST00000557538 FRA10AC1Q70Z53 315 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 TMUB2Q71RG4 321 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 PAGE2Q7Z2X7 111 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 PEX26Q7Z412 305 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 NT5DC3Q86UY8 548 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 PRSS58Q8IYP2 241 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 KATNAL2Q8IYT4 538 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 SELENOHQ8IZQ5 122 aaKnown RBP1.39□□□□□ -2.19
HIF1A-212ENST00000557538 KDM8Q8N371 416 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 Q8N377 158 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 LRRC18Q8N456 261 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 TMEM156Q8N614 296 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 RNF148Q8N7C7 305 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 GATSQ8NAP1 163 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 KIAA0895Q8NCT3 520 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 OR10A7Q8NGE5 316 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 OR1B1Q8NGR6 318 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF519Q8TB69 540 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 SSC4DQ8WTU2 575 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 FAM222BQ8WU58 562 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 ESR2Q92731 530 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 SMIM10Q96HG1 83 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 C14orf144Q96I85 54 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 PACRGQ96M98 296 aaPredicted RBP1.39□□□□□ -2.19
HIF1A-212ENST00000557538 AGPAT1Q99943 283 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 ST6GALNAC5Q9BVH7 336 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 KIFC1Q9BW19 673 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 RBM24Q9BX46 236 aaKnown RBP1.39□□□□□ -2.19
HIF1A-212ENST00000557538 DNTTIP1Q9H147 329 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 COG4Q9H9E3 785 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 GID8Q9NWU2 228 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 VNN3Q9NY84 501 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 TECRQ9NZ01 308 aaKnown RBP1.39□□□□□ -2.19
HIF1A-212ENST00000557538 GCNT4Q9P109 453 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 CACNG5Q9UF02 275 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 TP53TG5Q9Y2B4 290 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 MMACHCQ9Y4U1 282 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 CSAG2Q9Y5P2 127 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 ETV7Q9Y603 341 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 SHANK2Q9UPX8 1470 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 AKAP11Q9UKA4 1901 aa1.39□□□□□ -2.19
HIF1A-212ENST00000557538 PCF11O94913 1555 aaKnown RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 CDK13Q14004 1512 aaKnown RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 FAM135AQ9P2D6 1515 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 IGHV3-16A0A0C4DH30 117 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 A0A1B0GUH1 482 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 FBLL1A6NHQ2 334 aaKnown RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 FAM47DPA6NHR8 397 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 VSTM2BA6NLU5 285 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 YJEFN3A6XGL0 299 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 E7ESA3 106 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 MKRN2OSH3BPM6 223 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 NUPL2O15504 423 aaKnown RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 KIAA0513O60268 411 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 IL1BP01584 269 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 PROS1P07225 676 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 HTR1AP08908 422 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 NQO2P16083 231 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 TBXA2RP21731 343 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 GPX3P22352 226 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 CYP2F1P24903 491 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 LMO2P25791 158 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 MAS1LP35410 378 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms