RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 VDAC3Q9Y277 283 aa11.29□□□□□ -0.6
SHMT2-233ENST00000557529 CORINQ9Y5Q5 1042 aa11.29□□□□□ -0.6
SHMT2-233ENST00000557529 WDFY4Q6ZS81 3184 aa11.29□□□□□ -0.6
SHMT2-233ENST00000557529 TRIM64BA6NI03 449 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 M0R082 166 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 MASP2O00187 686 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 TM4SF5O14894 197 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 GABARAPO95166 117 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 IGHA1P01876 353 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 P04436 131 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 ADRA2AP08913 450 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 HIST1H1CP16403 213 aaKnown RBP11.28□□□□□ -0.6
SHMT2-233ENST00000557529 CD36P16671 472 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 GRPRP30550 384 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 SDHAP31040 664 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 NOVA1P51513 510 aaKnown RBP11.28□□□□□ -0.6
SHMT2-233ENST00000557529 RPS7P62081 194 aaKnown RBP11.28□□□□□ -0.6
SHMT2-233ENST00000557529 POU4F2Q12837 409 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 AIMP2Q13155 320 aaKnown RBP11.28□□□□□ -0.6
SHMT2-233ENST00000557529 SPHARQ15513 63 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 GXYLT1Q4G148 440 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 KLHL12Q53G59 568 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 ARMCX4Q5H9R4 360 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 DCAF10Q5QP82 559 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 LCN1P1Q5VSP4 162 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 JAZF1Q86VZ6 243 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 SLC25A43Q8WUT9 341 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-233ENST00000557529 SLC25A36Q96CQ1 311 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 TMEM41AQ96HV5 264 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 MGLLQ99685 303 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 OR11A1Q9GZK7 315 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 OR51V1Q9H2C8 321 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 MED20Q9H944 212 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 KLHL1Q9NR64 748 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 INPP5EQ9NRR6 644 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 SACM1LQ9NTJ5 587 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 MRPL39Q9NYK5 338 aaKnown RBP11.28□□□□□ -0.6
SHMT2-233ENST00000557529 HAO2Q9NYQ3 351 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 ABI3Q9P2A4 366 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 GRHPRQ9UBQ7 328 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 IL17BQ9UHF5 180 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 CLEC2DQ9UHP7 191 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 FBXL2Q9UKC9 423 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 LSM2Q9Y333 95 aaKnown RBP11.28□□□□□ -0.6
SHMT2-233ENST00000557529 ADAM18Q9Y3Q7 739 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 HRH3Q9Y5N1 445 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 MRPS18BQ9Y676 258 aaKnown RBP11.28□□□□□ -0.6
SHMT2-233ENST00000557529 TEX13CA0A0J9YWL9 993 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 CCDC182A6NF36 153 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 CDK2AP1O14519 115 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 SLC22A1O15245 554 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 DXOO77932 396 aaKnown RBP11.28□□□□□ -0.6
SHMT2-233ENST00000557529 OR6A2O95222 327 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 WISP1O95388 367 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 HSMCR30P0CW71 290 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 TFPIP10646 304 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 LIFP15018 202 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 SLC2A5P22732 501 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 GTF2E2P29084 291 aaKnown RBP11.28□□□□□ -0.6
SHMT2-233ENST00000557529 IDUAP35475 653 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 TGFBR2P37173 567 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 LIPAP38571 399 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 CASRP41180 1078 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 CYB561P49447 251 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 CLK1P49759 484 aaKnown RBP11.28□□□□□ -0.6
SHMT2-233ENST00000557529 ETV1P50549 477 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 DSCR4P56555 118 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-233ENST00000557529 SLC35D3Q5M8T2 416 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 B3GNTL1Q67FW5 361 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-233ENST00000557529 C3orf33Q6P1S2 294 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 SLC16A12Q6ZSM3 486 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 TMPRSS7Q7RTY8 843 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 FAM122BQ7Z309 247 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 SCAIQ8N9R8 606 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 CYB561A3Q8NBI2 242 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 LSM14AQ8ND56 463 aaKnown RBP11.28□□□□□ -0.6
SHMT2-233ENST00000557529 SDR9C7Q8NEX9 313 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 OR1J4Q8NGS1 313 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 POC1BQ8TC44 478 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 PSMF1Q92530 271 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 KISS1RQ969F8 398 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-233ENST00000557529 DTNBP1Q96EV8 351 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 OR5M11Q96RB7 305 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 TEAD3Q99594 435 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 HCAR1Q9BXC0 346 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 ISYNA1Q9NPH2 558 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 ASCL3Q9NQ33 180 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 INIPQ9NRY2 104 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 TAS2R5Q9NYW4 299 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 STMN3Q9NZ72 180 aa11.28□□□□□ -0.6
SHMT2-233ENST00000557529 AHCTF1Q8WYP5 2266 aa11.27□□□□□ -0.6
SHMT2-233ENST00000557529 FTCDNL1E5RQL4 147 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 CCRL2O00421 344 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 PLPP3O14495 311 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 CBR3O75828 277 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 APOL3O95236 402 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 ATE1O95260 518 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 F13BP05160 661 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 SCG5P05408 212 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 LIPCP11150 499 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms