RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 TMEM71Q6P5X7 295 aa9.21□□□□□ -0.94
TMEM260-211ENST00000556648 SLC29A4Q7RTT9 530 aa9.21□□□□□ -0.94
TMEM260-211ENST00000556648 GPALPP1Q8IXQ4 340 aa9.21□□□□□ -0.94
TMEM260-211ENST00000556648 EXD3Q8N9H8 876 aa9.21□□□□□ -0.94
TMEM260-211ENST00000556648 ZNF511Q8NB15 262 aa9.21□□□□□ -0.94
TMEM260-211ENST00000556648 STT3BQ8TCJ2 826 aa9.21□□□□□ -0.94
TMEM260-211ENST00000556648 THAP3Q8WTV1 239 aaPredicted RBP9.21□□□□□ -0.94
TMEM260-211ENST00000556648 TSPAN32Q96QS1 320 aa9.21□□□□□ -0.94
TMEM260-211ENST00000556648 NPAS1Q99742 590 aa9.21□□□□□ -0.94
TMEM260-211ENST00000556648 ADAM19Q9H013 955 aa9.21□□□□□ -0.94
TMEM260-211ENST00000556648 ACOXLQ9NUZ1 547 aa9.21□□□□□ -0.94
TMEM260-211ENST00000556648 COPS7AQ9UBW8 275 aa9.21□□□□□ -0.94
TMEM260-211ENST00000556648 GNG8Q9UK08 70 aa9.21□□□□□ -0.94
TMEM260-211ENST00000556648 MRTO4Q9UKD2 239 aaKnown RBP9.21□□□□□ -0.94
TMEM260-211ENST00000556648 KLHDC2Q9Y2U9 406 aa9.21□□□□□ -0.94
TMEM260-211ENST00000556648 HRH3Q9Y5N1 445 aa9.21□□□□□ -0.94
TMEM260-211ENST00000556648 CABIN1Q9Y6J0 2220 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 A0A0G2JK05 382 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 A0A1B0GTQ1 180 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 ALG1L2C9J202 215 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 SNPHO15079 494 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 NUDT14O95848 222 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 GPANK1O95872 356 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 BGLAPP02818 100 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 CD14P08571 375 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 GALP22466 123 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 THBS2P35442 1172 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 MTNR1BP49286 362 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 PRPS1P60891 318 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 DCAF7P61962 342 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 PON3Q15166 354 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 SLC25A35Q3KQZ1 300 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 CDONQ4KMG0 1287 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 ALG10Q5BKT4 473 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 MESTQ5EB52 335 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 LCN1P1Q5VSP4 162 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 FAM69BQ5VUD6 431 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 OTPQ5XKR4 325 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 PMS2CLQ68D20 193 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 RHBDD2Q6NTF9 364 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 PWWP2BQ6NUJ5 590 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 XKRXQ6PP77 449 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 ANKRD37Q7Z713 158 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 SYT9Q86SS6 491 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 JAZF1Q86VZ6 243 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 POMGNT2Q8NAT1 580 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 CEP76Q8TAP6 659 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 SAP25Q8TEE9 199 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 GHSRQ92847 366 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 CCDC74BQ96LY2 380 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 LRFN5Q96NI6 719 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 TBL1XR1Q9BZK7 514 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 SLC7A5P2Q9GIP4 190 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 APMAPQ9HDC9 416 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 NOX1Q9Y5S8 564 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 SEC16AO15027 2179 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 CPAMD8Q8IZJ3 1885 aa9.2□□□□□ -0.94
TMEM260-211ENST00000556648 EXPH5Q8NEV8 1989 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 A0A0B4J203 849 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 IGHV5-10-1A0A0J9YXX1 117 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 A0A1B0GVC2 190 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 TMEM72A0PK05 275 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 A6NIN4 97 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 GDF9O60383 454 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 CDC40O60508 579 aaKnown RBP eCLIP9.19□□□□□ -0.94
TMEM260-211ENST00000556648 SC5DO75845 299 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 OR2T7P0C7T2 308 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 SLC2A2P11168 524 aaPredicted RBP9.19□□□□□ -0.94
TMEM260-211ENST00000556648 PSKH1P11801 424 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 EVI2BP34910 448 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 EIF2B2P49770 351 aaKnown RBP9.19□□□□□ -0.94
TMEM260-211ENST00000556648 GDI2P50395 445 aaKnown RBP9.19□□□□□ -0.94
TMEM260-211ENST00000556648 NRG3P56975 720 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 DAB2P98082 770 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 SELENBP1Q13228 472 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 CDK5R1Q15078 307 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 HLA-BQ31612 363 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 ACSM3Q53FZ2 586 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 OR5M10Q6IEU7 315 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 NANOGNBQ7Z5D8 188 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 PXKQ7Z7A4 578 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 UBE2J2Q8N2K1 259 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 PLPP5Q8NEB5 264 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 IL17RDQ8NFM7 739 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 OR2T27Q8NH04 317 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 LIPHQ8WWY8 451 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 PIGKQ92643 395 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 RNF166Q96A37 237 aaPredicted RBP9.19□□□□□ -0.94
TMEM260-211ENST00000556648 ORAI1Q96D31 301 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 TMCO6Q96DC7 493 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 SOSTQ9BQB4 213 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 ALG12Q9BV10 488 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 PTDSS2Q9BVG9 487 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 C11orf54Q9H0W9 315 aaPredicted RBP9.19□□□□□ -0.94
TMEM260-211ENST00000556648 KCNN2Q9H2S1 579 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 PILRBQ9UKJ0 227 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 A0A1W2PQD3 144 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 TVP23AA6NH52 213 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 C11orf98E9PRG8 122 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 OGG1O15527 345 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms