RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 ROR2Q01974 943 aaKnown RBP11.99□□□□□ -0.49
ACTN1-219ENST00000556432 REP15Q6BDI9 236 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 RBMS3Q6XE24 437 aaKnown RBP11.99□□□□□ -0.49
ACTN1-219ENST00000556432 LINGO2Q7L985 606 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 NATD1Q8N6N6 113 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 FAM169BQ8N8A8 192 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 ZDHHC22Q8N966 263 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 OR4M2Q8NGB6 313 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 NANPQ8TBE9 248 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 SYT3Q9BQG1 590 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 TAPBPLQ9BX59 468 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 MRPL37Q9BZE1 423 aaKnown RBP11.99□□□□□ -0.49
ACTN1-219ENST00000556432 RACGAP1Q9H0H5 632 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 MS4A5Q9H3V2 200 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 NOX3Q9HBY0 568 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 EXOSC3Q9NQT5 275 aaKnown RBP11.99□□□□□ -0.49
ACTN1-219ENST00000556432 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.99□□□□□ -0.49
ACTN1-219ENST00000556432 NOX1Q9Y5S8 564 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 LIPT2A6NK58 231 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 PEX11AO75192 247 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 UPK3AO75631 287 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 MPZL1O95297 269 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 PROCP04070 461 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 OR12D1P0DN82 309 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 HKR1P10072 659 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 ARAFP10398 606 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 UQCRBP14927 111 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 CXCR1P25024 350 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 FPR2P25090 351 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 GCAP28676 217 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 ARR3P36575 388 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 TMEM33P57088 247 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 ARF1P84077 181 aaKnown RBP11.98□□□□□ -0.49
ACTN1-219ENST00000556432 PGS1Q32NB8 556 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 GPAT3Q53EU6 434 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 PRAMEF8Q5VWM4 474 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 PRAMEF7Q5VXH5 474 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 KANK2Q63ZY3 851 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 TYW3Q6IPR3 259 aaKnown RBP11.98□□□□□ -0.49
ACTN1-219ENST00000556432 ACSM5Q6NUN0 579 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 TNFAIP8L2Q6P589 184 aaPredicted RBP11.98□□□□□ -0.49
ACTN1-219ENST00000556432 MDP1Q86V88 176 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 RIBC1Q8N443 379 aaPredicted RBP11.98□□□□□ -0.49
ACTN1-219ENST00000556432 TWIST2Q8WVJ9 160 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 CNOT9Q92600 299 aaKnown RBP11.98□□□□□ -0.49
ACTN1-219ENST00000556432 RAB8BQ92930 207 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 PPP3R2Q96LZ3 170 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 DUSP26Q9BV47 211 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 ZNF416Q9BWM5 594 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 NELFAQ9H3P2 528 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 TBK1Q9UHD2 729 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 DNAJC15Q9Y5T4 150 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 NOTCH1P46531 2555 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 WNK2Q9Y3S1 2297 aa11.98□□□□□ -0.49
ACTN1-219ENST00000556432 TMEM233B4DJY2 109 aa11.97□□□□□ -0.49
ACTN1-219ENST00000556432 LYPLA1O75608 230 aaPredicted RBP11.97□□□□□ -0.49
ACTN1-219ENST00000556432 AGR2O95994 175 aa11.97□□□□□ -0.49
ACTN1-219ENST00000556432 HOXB1P14653 301 aaPredicted RBP11.97□□□□□ -0.49
ACTN1-219ENST00000556432 CPA3P15088 417 aa11.97□□□□□ -0.49
ACTN1-219ENST00000556432 ZFP36P26651 326 aaKnown RBP11.97□□□□□ -0.49
ACTN1-219ENST00000556432 LMO4P61968 165 aa11.97□□□□□ -0.49
ACTN1-219ENST00000556432 POU3F1Q03052 451 aaPredicted RBP11.97□□□□□ -0.49
ACTN1-219ENST00000556432 ZP4Q12836 540 aa11.97□□□□□ -0.49
ACTN1-219ENST00000556432 MAD2L1BPQ15013 274 aaPredicted RBP11.97□□□□□ -0.49
ACTN1-219ENST00000556432 GKAP1Q5VSY0 366 aaPredicted RBP11.97□□□□□ -0.49
ACTN1-219ENST00000556432 DCAF12L2Q5VW00 463 aa11.97□□□□□ -0.49
ACTN1-219ENST00000556432 CREB3L2Q70SY1 520 aa11.97□□□□□ -0.49
ACTN1-219ENST00000556432 CLECL1Q8IZS7 167 aa11.97□□□□□ -0.49
ACTN1-219ENST00000556432 IL17RDQ8NFM7 739 aa11.97□□□□□ -0.49
ACTN1-219ENST00000556432 OIT3Q8WWZ8 545 aa11.97□□□□□ -0.49
ACTN1-219ENST00000556432 YIPF5Q969M3 257 aa11.97□□□□□ -0.49
ACTN1-219ENST00000556432 ROPN1LQ96C74 230 aa11.97□□□□□ -0.49
ACTN1-219ENST00000556432 COQ8BQ96D53 544 aa11.97□□□□□ -0.49
ACTN1-219ENST00000556432 ZG16BQ96DA0 208 aa11.97□□□□□ -0.49
ACTN1-219ENST00000556432 DUX5Q96PT3 197 aa11.97□□□□□ -0.49
ACTN1-219ENST00000556432 PIF1Q9H611 641 aa11.97□□□□□ -0.49
ACTN1-219ENST00000556432 ZNF665Q9H7R5 613 aa11.97□□□□□ -0.49
ACTN1-219ENST00000556432 UNKLQ9H9P5 680 aaKnown RBP11.97□□□□□ -0.49
ACTN1-219ENST00000556432 NTN4Q9HB63 628 aa11.97□□□□□ -0.49
ACTN1-219ENST00000556432 G6PC2Q9NQR9 355 aa11.97□□□□□ -0.49
ACTN1-219ENST00000556432 POLE3Q9NRF9 147 aa11.97□□□□□ -0.49
ACTN1-219ENST00000556432 PSMC3IPQ9P2W1 217 aaPredicted RBP11.97□□□□□ -0.49
ACTN1-219ENST00000556432 FZR1Q9UM11 496 aa11.97□□□□□ -0.49
ACTN1-219ENST00000556432 TRRAPQ9Y4A5 3859 aa11.97□□□□□ -0.49
ACTN1-219ENST00000556432 VWFP04275 2813 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 A0A1W2PPW3 197 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 PLPP2O43688 288 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 PLIN3O60664 434 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 SEC14L2O76054 403 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 PRSS23O95084 383 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 GSNP06396 782 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 CHRM4P08173 479 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 PRPS1L1P21108 318 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 NR4A1P22736 598 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 EVX1P49640 407 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 MAP2K6P52564 334 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 SEC24CP53992 1094 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 ETF1P62495 437 aaKnown RBP11.96□□□□□ -0.49
ACTN1-219ENST00000556432 MVKQ03426 396 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 CKAP4Q07065 602 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms