RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 SLC9B1Q4ZJI4 515 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 SLC25A53Q5H9E4 307 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 ELFN2Q5R3F8 820 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 GRTP1Q5TC63 336 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 ACSM5Q6NUN0 579 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 CBLN3Q6UW01 205 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 CYS1Q717R9 158 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 TRMT10CQ7L0Y3 403 aaKnown RBP5.88□□□□□ -1.47
ATXN3-236ENST00000556220 SPATA21Q7Z572 469 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 CENPLQ8N0S6 344 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-236ENST00000556220 SIGLECL1Q8N7X8 197 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 NUP37Q8NFH4 326 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 OR4M2Q8NGB6 313 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 OR6Y1Q8NGX8 325 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 CEP70Q8NHQ1 597 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 C22orf15Q8WYQ4 148 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.88□□□□□ -1.47
ATXN3-236ENST00000556220 ZNF524Q96C55 264 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 BOD1Q96IK1 185 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 AMDHD1Q96NU7 426 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 ANKRD27Q96NW4 1050 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 ZNF442Q9H7R0 627 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 ZMAT3Q9HA38 289 aaKnown RBP5.88□□□□□ -1.47
ATXN3-236ENST00000556220 OBP2BQ9NPH6 170 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 EQTNQ9NQ60 294 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.88□□□□□ -1.47
ATXN3-236ENST00000556220 TAS2R7Q9NYW3 318 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 PDP1Q9P0J1 537 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-236ENST00000556220 UPB1Q9UBR1 384 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 PCTPQ9UKL6 214 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 ICAM5Q9UMF0 924 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 SNX6Q9UNH7 406 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 MMP24Q9Y5R2 645 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 NOTCH3Q9UM47 2321 aa5.88□□□□□ -1.47
ATXN3-236ENST00000556220 DNAH9Q9NYC9 4486 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 GNG14A0A1W2PPG7 69 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 SULT2B1O00204 365 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 PPP6CO00743 305 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 EIF3HO15372 352 aaKnown RBP eCLIP5.87□□□□□ -1.47
ATXN3-236ENST00000556220 PLPP2O43688 288 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 MPZL1O95297 269 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 PRPS2P11908 318 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 HSD3B1P14060 373 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 CHN1P15882 459 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 MDKP21741 143 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-236ENST00000556220 ACHEP22303 614 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 HSD3B2P26439 372 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 CALCRP30988 508 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 GSTM5P46439 218 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 SLC16A1P53985 500 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 MAGOHP61326 146 aaKnown RBP5.87□□□□□ -1.47
ATXN3-236ENST00000556220 HGFACQ04756 655 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 SRSF4Q08170 494 aaKnown RBP5.87□□□□□ -1.47
ATXN3-236ENST00000556220 C2orf80Q0P641 193 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 ZP4Q12836 540 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 CALCOCO2Q13137 446 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 C3orf36Q3SXR2 165 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 HIKESHIQ53FT3 197 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 KLHL26Q53HC5 615 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 ZNF311Q5JNZ3 666 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 AGBL2Q5U5Z8 902 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 CD276Q5ZPR3 534 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 C3orf33Q6P1S2 294 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 LEG1Q6P5S2 330 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 KLHL24Q6TFL4 600 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 DOK3Q7L591 496 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 CCDC91Q7Z6B0 441 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 RIBC1Q8N443 379 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-236ENST00000556220 CELF2-AS1Q8N7Q2 184 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 STPG3Q8N7X2 389 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 PTGR2Q8N8N7 351 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-236ENST00000556220 CDRT4Q8N9R6 151 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 FBXO30Q8TB52 745 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 CKAP2Q8WWK9 683 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 RDH5Q92781 318 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 TAF15Q92804 592 aaKnown RBP eCLIP5.87□□□□□ -1.47
ATXN3-236ENST00000556220 PHF21BQ96EK2 531 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 ATP6V1G3Q96LB4 118 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 C1orf147Q96MC9 270 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-236ENST00000556220 GPR78Q96P69 363 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 DUX5Q96PT3 197 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 CCT8L2Q96SF2 557 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 PAFAH2Q99487 392 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 KCNJ15Q99712 375 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 TPK1Q9H3S4 243 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 DYNLRB1Q9NP97 96 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 SLC7A10Q9NS82 523 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 PARPBPQ9NWS1 579 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 CPSF2Q9P2I0 782 aaKnown RBP5.87□□□□□ -1.47
ATXN3-236ENST00000556220 SLC17A7Q9P2U7 560 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 CRNNQ9UBG3 495 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-236ENST00000556220 OPN4Q9UHM6 478 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 CARD8Q9Y2G2 431 aa5.87□□□□□ -1.47
ATXN3-236ENST00000556220 TENM3Q9P273 2699 aa5.86□□□□□ -1.47
ATXN3-236ENST00000556220 DNAJC9-AS1A6NH13 148 aa5.86□□□□□ -1.47
ATXN3-236ENST00000556220 H3BNH8 94 aa5.86□□□□□ -1.47
ATXN3-236ENST00000556220 CLDN34H7C241 214 aa5.86□□□□□ -1.47
ATXN3-236ENST00000556220 M0QZ24 198 aa5.86□□□□□ -1.47
ATXN3-236ENST00000556220 GTPBP1O00178 669 aaKnown RBP5.86□□□□□ -1.47
ATXN3-236ENST00000556220 PRODHO43272 600 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms