RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 MAP1AP78559 2803 aaPredicted RBP12.06□□□□□ -0.48
SNX6-203ENST00000555416 TEP1Q99973 2627 aaKnown RBP12.06□□□□□ -0.48
SNX6-203ENST00000555416 GMNCA6NCL1 334 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 ENO4A6NNW6 628 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 FAM220BPB1ANY3 271 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 M0R082 166 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 PDLIM1O00151 329 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 BGLAPP02818 100 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 ART1P52961 327 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 NCALDP61601 193 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 FAPQ12884 760 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 ENTPD8Q5MY95 495 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 INTS11Q5TA45 600 aaKnown RBP12.05□□□□□ -0.48
SNX6-203ENST00000555416 C9orf135Q5VTT2 229 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 FAM91A1Q658Y4 838 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 TMEM225Q6GV28 225 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 LINC00114Q6XXX2 140 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 RANBP3LQ86VV4 465 aaPredicted RBP12.05□□□□□ -0.48
SNX6-203ENST00000555416 WDFY1Q8IWB7 410 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 UBE2J2Q8N2K1 259 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 ZNF417Q8TAU3 575 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 TMEM45BQ96B21 275 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 SLC47A1Q96FL8 570 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 PLPPR2Q96GM1 343 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 MOGAT1Q96PD6 335 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 ZNF587Q96SQ5 575 aaPredicted RBP12.05□□□□□ -0.48
SNX6-203ENST00000555416 SF3B5Q9BWJ5 86 aaKnown RBP12.05□□□□□ -0.48
SNX6-203ENST00000555416 HDHD5Q9BXW7 423 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 OR10A4Q9H209 315 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 TMEM27Q9HBJ8 222 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 MALT1Q9UDY8 824 aa12.05□□□□□ -0.48
SNX6-203ENST00000555416 F8P00451 2351 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 RAI1Q7Z5J4 1906 aaPredicted RBP12.04□□□□□ -0.48
SNX6-203ENST00000555416 TRAV36DV7A0A075B6V5 113 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 A0A1W2PR80 420 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 NME4O00746 187 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 FMO6PO60774 539 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 RAD51DO75771 328 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 HPRP00739 348 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 CD53P19397 219 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 FUT4P22083 530 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 GRPRP30550 384 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 SELENOPP49908 381 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 SLC7A2P52569 658 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 VEZF1Q14119 521 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 STK11Q15831 433 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 BEX5Q5H9J7 111 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 FAM69AQ5T7M9 428 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 ZNF613Q6PF04 617 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 CREB3L2Q70SY1 520 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 LINGO2Q7L985 606 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 CARM1Q86X55 608 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 MICU2Q8IYU8 434 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 OR2T12Q8NG77 320 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 SLC26A7Q8TE54 656 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 ADAMTS16Q8TE57 1224 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 FANCFQ9NPI8 374 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 ASB6Q9NWX5 421 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 NPAP1Q9NZP6 1156 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 SLC9A8Q9Y2E8 581 aa12.04□□□□□ -0.48
SNX6-203ENST00000555416 CADP27708 2225 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 MS4A18H0YCH9 400 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 CNOT4O95628 575 aaKnown RBP12.03□□□□□ -0.48
SNX6-203ENST00000555416 RAF1P04049 648 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 HLA-DOBP13765 273 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 KDELR2P33947 212 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 OR1E2P47887 323 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 LIPEQ05469 1076 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 MS4A18Q3C1V0 323 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 LRRC23Q53EV4 343 aaPredicted RBP12.03□□□□□ -0.48
SNX6-203ENST00000555416 CYBRD1Q53TN4 286 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 ERICH5Q6P6B1 374 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 NHLRC1Q6VVB1 395 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 AAED1Q7RTV5 226 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 CPLX4Q7Z7G2 160 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 LILRB1Q8NHL6 650 aaPredicted RBP12.03□□□□□ -0.48
SNX6-203ENST00000555416 HSD17B8Q92506 261 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 NEUROG1Q92886 237 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 NINJ1Q92982 152 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 SLC41A3Q96GZ6 507 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 PRSS27Q9BQR3 290 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 TMEM204Q9BSN7 226 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 TMEM43Q9BTV4 400 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 PCDHAC1Q9H158 963 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 UBTD1Q9HAC8 227 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 SLC7A7Q9UM01 511 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 RASD1Q9Y272 281 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 SH3GLB1Q9Y371 365 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 ALPK2Q86TB3 2170 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 ITPR3Q14573 2671 aa12.03□□□□□ -0.48
SNX6-203ENST00000555416 ELOVL7A1L3X0 281 aa12.02□□□□□ -0.49
SNX6-203ENST00000555416 TRAPPC13A5PLN9 417 aa12.02□□□□□ -0.49
SNX6-203ENST00000555416 DPRXA6NFQ7 191 aa12.02□□□□□ -0.49
SNX6-203ENST00000555416 OR5H1A6NKK0 313 aa12.02□□□□□ -0.49
SNX6-203ENST00000555416 DYNC1I1O14576 645 aa12.02□□□□□ -0.49
SNX6-203ENST00000555416 CHP2O43745 196 aa12.02□□□□□ -0.49
SNX6-203ENST00000555416 GGT1P19440 569 aa12.02□□□□□ -0.49
SNX6-203ENST00000555416 DNASE1P24855 282 aa12.02□□□□□ -0.49
SNX6-203ENST00000555416 GSK3BP49841 420 aa12.02□□□□□ -0.49
SNX6-203ENST00000555416 NUDT2P50583 147 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms