RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 ANKRD19PQ9H560 264 aa9.2□□□□□ -0.94
NEK9-205ENST00000555405 MED29Q9NX70 200 aa9.2□□□□□ -0.94
NEK9-205ENST00000555405 SH3BGRL2Q9UJC5 107 aa9.2□□□□□ -0.94
NEK9-205ENST00000555405 SIGLEC7Q9Y286 467 aa9.2□□□□□ -0.94
NEK9-205ENST00000555405 A0A1W2PQ72 361 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 LRRC3CA6NJW4 275 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 NPIPA2E9PIF3 369 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 NPIPA3F8WFD2 350 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 PRKYO43930 277 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 NDUFB2O95178 105 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 HLA-DOBP13765 273 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 IDUAP35475 653 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 ESRRGP62508 458 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 RPL18Q07020 188 aaKnown RBP9.19□□□□□ -0.94
NEK9-205ENST00000555405 GTF3C1Q12789 2109 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 FAM69AQ5T7M9 428 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 C3orf33Q6P1S2 294 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 MYO7BQ6PIF6 2116 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 UNQ6494/PRO21346Q6UXR6 183 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 RASSF6Q6ZTQ3 369 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 CPOQ8IVL8 374 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 CHERPQ8IWX8 916 aaKnown RBP9.19□□□□□ -0.94
NEK9-205ENST00000555405 OR5M9Q8NGP3 310 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 SMAP2Q8WU79 429 aaPredicted RBP9.19□□□□□ -0.94
NEK9-205ENST00000555405 LRR1Q96L50 414 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 MRGPRX4Q96LA9 322 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 TSSK2Q96PF2 358 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 PIGQQ9BRB3 760 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 FUZQ9BT04 418 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 C8orf4Q9NR00 106 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 TP53TG5Q9Y2B4 290 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 CDH10Q9Y6N8 788 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 GUSBP08236 651 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 CLUP10909 449 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 ZNF24P17028 368 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 GGT2P36268 569 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 POU3F1Q03052 451 aaPredicted RBP9.19□□□□□ -0.94
NEK9-205ENST00000555405 RNFT1Q5M7Z0 435 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 ENTHD1Q8IYW4 607 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 UCN2Q96RP3 112 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 SECISBP2Q96T21 854 aaKnown RBP9.19□□□□□ -0.94
NEK9-205ENST00000555405 ENOPH1Q9UHY7 261 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 ZNF346Q9UL40 294 aaKnown RBP9.19□□□□□ -0.94
NEK9-205ENST00000555405 MYRFQ9Y2G1 1151 aa9.19□□□□□ -0.94
NEK9-205ENST00000555405 TRAV17A0A0B4J275 112 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 TEX13CA0A0J9YWL9 993 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 CCDC160A6NGH7 325 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 ACOT7O00154 380 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 DPM1O60762 260 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 LYNP07948 512 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 MRPL3P09001 348 aaKnown RBP9.18□□□□□ -0.94
NEK9-205ENST00000555405 ENPP1P22413 925 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 SLC6A6P31641 620 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 HTR3AP46098 478 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 CDK5R2Q13319 367 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 EEF1A1P5Q5VTE0 462 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 C3P1Q6ZMU1 363 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 OR6K6Q8NGW6 343 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 NMNAT3Q96T66 252 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 ANKRD60Q9BZ19 345 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 MCCC2Q9HCC0 563 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 CLN6Q9NWW5 311 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 CAMK2AQ9UQM7 478 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 LIPGQ9Y5X9 500 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 PHF3Q92576 2039 aaKnown RBP9.18□□□□□ -0.94
NEK9-205ENST00000555405 A0A0J9YW62 118 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 DENRO43583 198 aaKnown RBP9.18□□□□□ -0.94
NEK9-205ENST00000555405 RAMP1O60894 148 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 ENTPD6O75354 484 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 HLA-DQA2P01906 255 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 CAPNS1P04632 268 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 RBM34P42696 430 aaKnown RBP9.18□□□□□ -0.94
NEK9-205ENST00000555405 DIO1P49895 249 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 FOXO1Q12778 655 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 NEDD8Q15843 81 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 C6orf141Q5SZD1 244 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 SWT1Q5T5J6 900 aaKnown RBP9.18□□□□□ -0.94
NEK9-205ENST00000555405 ZNF691Q5VV52 312 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 ASB18Q6ZVZ8 466 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 TMPRSS11FQ6ZWK6 438 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 DEPDC4Q8N2C3 294 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 BBS1Q8NFJ9 593 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 TM9SF4Q92544 642 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 HTRA1Q92743 480 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 ZNF845Q96IR2 970 aaPredicted RBP9.18□□□□□ -0.94
NEK9-205ENST00000555405 HRASLS5Q96KN8 279 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 PNPLA3Q9NST1 481 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 SCN3BQ9NY72 215 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 GRHPRQ9UBQ7 328 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 SPIN1Q9Y657 262 aaPredicted RBP9.18□□□□□ -0.94
NEK9-205ENST00000555405 H0YAE9 185 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 OR2T1O43869 369 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 TRIM3O75382 744 aaPredicted RBP9.18□□□□□ -0.94
NEK9-205ENST00000555405 IMPDH2P12268 514 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 MYF6P23409 242 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 SRD5A2P31213 254 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 EIF1P41567 113 aaKnown RBP9.18□□□□□ -0.94
NEK9-205ENST00000555405 SUMO3P55854 103 aaPredicted RBP9.18□□□□□ -0.94
NEK9-205ENST00000555405 CRMP1Q14194 572 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 PGGHGQ32M88 737 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms